Streptomyces phytohabitans: ABXR15_05655
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Entry
ABXR15_05655 CDS
T10861
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
spih Streptomyces phytohabitans
Brite
KEGG Orthology (KO) [BR:
spih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spih03016
]
ABXR15_05655 (truB)
Enzymes [BR:
spih01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ABXR15_05655 (truB)
Transfer RNA biogenesis [BR:
spih03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ABXR15_05655 (truB)
Prokaryotic type
ABXR15_05655 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
EKR
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
XCX48692
LinkDB
All DBs
Position
complement(1392321..1393268)
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AA seq
315 aa
AA seq
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MKRGSPYEPGGLVIVDKPAGHTSHDVVAKLRGMARTRRVGHAGTLDPMATGVLVLGVERA
TKLLGFLALTEKEYVGTVRLGQSTLTDDAEGEPTASRDASGVTREQIEAGVAEWTGDVMQ
VPSKVSAIKIDGKRSYKRARDGDDFEIPARPVTVSSFVVHGVHEERAEDGTPVLDVLVSV
VCSSGTYIRALARDLGAGLGVGGHLTALRRTRVGPYGLDTARTLEKLQAERDGSDAIGLL
PLADAASAAFPRWDVDDRRAGLLANGVQIALTGPAAGAGDGVPVAAFGPDGRFVALVEGH
AGRARSLAVFAPPRD
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcgcggcagcccgtacgagcccggcgggctcgtcatcgtcgacaagcccgccggg
cacacctcccacgacgtggtcgcgaagctccgcggcatggcccgtacccgccgggtgggg
cacgcggggacgctcgacccgatggccaccggggtgctggtgctgggggtggagcgggcc
acgaagctgctcgggttcctggcgctgacggagaaggagtacgtcggcaccgtacggctc
gggcagagcaccctgaccgacgacgcggagggcgagccgaccgcgtcccgggacgcctcc
ggggtgacccgggagcagatcgaggcgggcgtcgcggagtggaccggcgacgtgatgcag
gtgccgtcgaaggtcagcgcgatcaagatcgacggcaagcgctcgtacaaacgggcccgg
gacggcgacgacttcgagatcccggcgcgtccggtgacggtctcgtcgttcgtggtgcac
ggcgtgcacgaggagcgggcggaggacggcacgcccgtgctggacgtgctggtctcggtg
gtgtgctcctccggtacgtacatccgcgcgctcgcccgcgacctgggcgccgggctcggc
gtcggcgggcatctgacggcgctgcggcgcacccgggtcggcccgtacgggctggacacc
gcgcgcacgttggagaagctccaggcggagcgggacgggtccgacgcgatcgggctgctg
ccgctggcggacgcggcgtcggcggcgttcccgcgctgggacgtggacgaccggcgggcg
ggtctgctggccaacggcgtgcagatcgcgctgaccggtccggcggccggggccggggac
ggcgtgccggtggccgcgttcggaccggacggccggttcgtggcgctggtcgaggggcac
gcggggcgggcccggagcctggcggtgttcgcgccgccgcgtgactga
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