Streptomyces phytohabitans: ABXR15_06020
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Entry
ABXR15_06020 CDS
T10861
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
spih Streptomyces phytohabitans
Pathway
spih02024
Quorum sensing
spih03060
Protein export
spih03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
spih00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
ABXR15_06020 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
ABXR15_06020 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ABXR15_06020 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
spih02044
]
ABXR15_06020 (ffh)
Enzymes [BR:
spih01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
ABXR15_06020 (ffh)
Secretion system [BR:
spih02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
ABXR15_06020 (ffh)
Eukaryotic Sec-SRP protein
ABXR15_06020 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
CbiA
cobW
Zeta_toxin
ArsA_ATPase
APS_kinase
AAA_24
nSTAND3
AAA_31
AAA_30
MMR_HSR1
NPHP3_N
AAA_18
MeaB
6PF2K
AAA_16
AAA_33
TsaE
Thymidylate_kin
Glyco_transf_4
MobB
ATP_bind_1
Motif
Other DBs
NCBI-ProteinID:
XCX48755
LinkDB
All DBs
Position
complement(1467766..1469322)
Genome browser
AA seq
518 aa
AA seq
DB search
MFDTLSDRLAATFKNLRGKGRLTEADIDATAREIRIALLEADVALSVVRAFIRQVKERAL
GAEVSQALNPAQQVVKIVNEELVGILGGETRRLRFAKNPPTVIMLAGLQGAGKTTLAGKL
GRWLQQQGHTPLLVACDLQRPNAVNQLSVVAERAGVAVYAPEPGNGVGDPVRVARDSVAH
AREKQYDVVVVDTAGRLGIDQELMRQAADIRDAVSPDEILFVVDAMIGQDAVTTAEAFRD
GVGFDGVVLSKLDGDARGGAALSVAQVTGKQIMFASNGEKLDDFDAFHPDRMASRILGMG
DMLTLIEKAEQTFSQQEAEQMAAKLAKGPKEFTLDDFLAQMEQVRKMGSLSKLLGMMPGM
GQMKDQINNLDERDVDRTAAIIKSMTPAERAEPTLINGSRRARIAKGSGVDVSAVKNLVE
RFFEARKMMSKMAQGGGMPGMPGMPGMGGAARKKGKQQKKAKGKRQSGNPMKRQQEEKAA
AERRAAGPSGGAFGLPGAGQDAGDFELPKEFRDILPPK
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgacactctctccgatcgcctcgcagcgaccttcaagaacctccggggcaagggc
cgcctcaccgaggcggacatcgacgccacggcgcgcgagatccgtatcgccctgctggag
gcggacgtcgcgctgtccgtcgtccgggccttcatcaggcaggtcaaggagcgcgccctc
ggcgccgaggtctcgcaggccctgaacccggcccagcaggtcgtcaagatcgtcaacgag
gagctggtcggcatcctcggcggcgagacccgccgcctccggttcgccaagaacccgccg
acggtgatcatgctcgccggcctccagggcgcgggcaagacgaccctggccggcaagctc
ggccgctggctccagcagcagggccacaccccgctgctcgtcgcctgcgacctccagcgc
ccgaacgcggtcaaccagctgtccgtcgtggccgagcgcgcgggcgtcgcggtctacgcg
ccggagccgggcaacggcgtcggcgacccggtccgggtcgcccgcgactccgtcgcccac
gcccgcgagaagcagtacgacgtggtcgtcgtcgacaccgcgggccgcctcggcatcgac
caggaactgatgcggcaggccgcggacatccgggacgcggtgagccccgacgagatcctc
ttcgtcgtcgacgccatgatcggccaggacgccgtcaccacggccgaggcgttccgggac
ggcgtgggcttcgacggcgtggtgctgtcgaagctcgacggcgacgcgcgcggcggcgcc
gccctgtcggtcgcccaggtcaccggcaagcagatcatgttcgcctcgaacggcgagaag
ctggacgacttcgacgcgttccacccggaccgcatggcgtcccgcatcctcggcatgggc
gacatgctcacgctgatcgagaaggccgagcagaccttcagccagcaagaggccgagcag
atggcggccaaactggcgaaggggcccaaggagttcacgctcgacgacttcctggcgcag
atggagcaggtccgcaagatgggctcgctctccaagctgctcgggatgatgccgggcatg
ggccagatgaaggaccagatcaacaacctggacgagcgcgacgtcgaccgtacggccgcc
atcatcaagtccatgacgcccgccgagcgcgccgagcccaccctgatcaacgggtcccgc
agggcgcgtatcgccaagggctccggcgtggacgtgagcgccgtcaagaacctggtggag
cgcttcttcgaggcgcgcaagatgatgtccaagatggcccagggcggcggcatgccggga
atgcccgggatgccgggcatgggtggcgccgcgcgcaagaagggcaagcagcagaagaag
gccaagggcaagcgccagtcggggaacccgatgaagcgccagcaggaggagaaggccgcc
gccgagcggcgcgcggccggtccgtccggcggcgcgttcgggctgccgggcgcgggccag
gacgcgggggacttcgaactgccgaaggagttccgggacatcctcccgccgaagtga
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