Streptomyces phytohabitans: ABXR15_06085
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Entry
ABXR15_06085 CDS
T10861
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
spih Streptomyces phytohabitans
Pathway
spih03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
spih00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
ABXR15_06085 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spih03019
]
ABXR15_06085 (rnc)
03009 Ribosome biogenesis [BR:
spih03009
]
ABXR15_06085 (rnc)
03036 Chromosome and associated proteins [BR:
spih03036
]
ABXR15_06085 (rnc)
Enzymes [BR:
spih01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
ABXR15_06085 (rnc)
Messenger RNA biogenesis [BR:
spih03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ABXR15_06085 (rnc)
Ribosome biogenesis [BR:
spih03009
]
Eukaryotic type
90S particles
RNase
ABXR15_06085 (rnc)
Prokaryotic type
rRNA processing factors
ABXR15_06085 (rnc)
Chromosome and associated proteins [BR:
spih03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
ABXR15_06085 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
XCX48768
LinkDB
All DBs
Position
complement(1485963..1486793)
Genome browser
AA seq
276 aa
AA seq
DB search
MADATTPGTPPRPSEVAPTASAELVDAASSHTLLEGRLGYQLESALLVRALTHRSFAYEN
GGLPTNERLEFLGDSVLGLVVTDTLYRIHPDLPEGQLAKLRAAVVNSRALAEVARGLDLG
AFIRLGRGEEGTGGRDKASILADTLEAVIGAVYLDQGLDAASELVHRLFDPLIEKSSSLG
AGLDWKTSLQELTAAETLGVPEYVVTETGPDHEKVFTAAARVGGVSYGTGTGRSKKEAEQ
QAAEAAYRGIRAEAAKASDTSGPGGADGGSADTVDA
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgccaccacgcctggtacgccgcctcgccccagcgaggtcgcaccgacggca
tcggcggaactggtggacgcggcctcgtcgcacacgttgctggaagggcggctcgggtac
cagcttgagtccgcccttctggtgcgtgcgctgacgcatcgctcgttcgcgtacgagaac
ggcgggctgcccaccaacgagcggctggaattcctcggggactccgtcctcggtctggtc
gtcaccgacacgctctaccgcatccaccccgacctgcccgaggggcagctcgccaagttg
cgcgccgcggtcgtcaactcgcgtgccctcgccgaggtcgcgcgcggactcgacctgggc
gcgttcatccggctcggccggggcgaggaggggaccggtggccgtgacaaggcgtcgatc
ctcgcggacacgctggaagcggtgatcggcgcggtctacctcgaccagggcctggacgcc
gcctccgagctggtgcaccggctcttcgacccgctcatcgagaagtcgtccagcctgggc
gccggcctggactggaagaccagcctccaggagctgacggcggccgagaccctgggcgtg
cccgagtacgtggtcaccgagaccggtccggaccacgagaaggtcttcactgctgccgcc
cgcgtcggtggtgtctcgtacggcaccggcaccggccgtagcaagaaggaagccgagcag
caggcggccgaggcggcgtaccgcggcatccgcgcggaggccgccaaggcgtcggacacg
tccggccccggtggggccgacggcggctccgccgacaccgtcgacgcgtag
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