Streptomyces phytohabitans: ABXR15_06170
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Entry
ABXR15_06170 CDS
T10861
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
spih Streptomyces phytohabitans
Brite
KEGG Orthology (KO) [BR:
spih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spih03032
]
ABXR15_06170
03036 Chromosome and associated proteins [BR:
spih03036
]
ABXR15_06170
03400 DNA repair and recombination proteins [BR:
spih03400
]
ABXR15_06170
DNA replication proteins [BR:
spih03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
ABXR15_06170
Chromosome and associated proteins [BR:
spih03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
ABXR15_06170
DNA repair and recombination proteins [BR:
spih03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
ABXR15_06170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HC2
Extensin_1
Motif
Other DBs
NCBI-ProteinID:
XCX48783
LinkDB
All DBs
Position
complement(1502112..1502759)
Genome browser
AA seq
215 aa
AA seq
DB search
MNKAQLVEAISDQLGGRQQAADAVDVVLDAIVRAVCAGERVSVTGFGSFEKVDRPARYAR
NPQTGERVRVKKTSVPRFRAGQGFKDLVSGAKKLPRNDVAVKKAPKGSLSGGGTATKKAA
TKKAAAKKAPAKAVAAKKTTAKKTVAKKTPAKKTTATKKTAAKKTTAKKSAAKKTTSKKA
AAKKAPAKKSTAKKAPARKSAARSRTAKKTTARKR
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaggcgcagctcgttgaagcaatttccgatcagctcggtggacgtcagcaggcc
gcggacgcggtcgacgtcgtactggacgcgattgtccgcgcggtgtgcgcgggcgagcgg
gtgtcggtcaccggcttcggttccttcgagaaggtcgaccggcccgcccgctacgcgcgc
aacccgcagaccggcgagcgcgtacgggtcaagaagacctccgtgccgcgcttccgcgcg
ggccagggattcaaggacctggtcagcggcgcgaagaagctcccgcggaacgacgtggcg
gtcaagaaggcgcccaagggaagcctttcgggcggcggcacggccacgaagaaggccgcc
accaagaaggccgcggcgaagaaggccccggcgaaggcggtcgcggcgaagaagaccacc
gccaagaagacggtcgcgaagaagacccccgccaagaagaccaccgccacgaagaagacg
gcggcgaagaagaccaccgcgaagaagagcgcggcgaagaagacgacgtcgaagaaggcc
gccgccaagaaggcgccggccaagaagagcaccgccaagaaggcgcccgcccggaagtcg
gcggcgcgcagcaggaccgccaagaagacgaccgcccgcaagcgttag
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