KEGG   Streptomyces phytohabitans: ABXR15_06170
Entry
ABXR15_06170      CDS       T10861                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
spih  Streptomyces phytohabitans
Brite
KEGG Orthology (KO) [BR:spih00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:spih03032]
    ABXR15_06170
   03036 Chromosome and associated proteins [BR:spih03036]
    ABXR15_06170
   03400 DNA repair and recombination proteins [BR:spih03400]
    ABXR15_06170
DNA replication proteins [BR:spih03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    ABXR15_06170
Chromosome and associated proteins [BR:spih03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    ABXR15_06170
DNA repair and recombination proteins [BR:spih03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      ABXR15_06170
SSDB
Motif
Pfam: Bac_DNA_binding HC2 Extensin_1
Other DBs
NCBI-ProteinID: XCX48783
LinkDB
Position
complement(1502112..1502759)
AA seq 215 aa
MNKAQLVEAISDQLGGRQQAADAVDVVLDAIVRAVCAGERVSVTGFGSFEKVDRPARYAR
NPQTGERVRVKKTSVPRFRAGQGFKDLVSGAKKLPRNDVAVKKAPKGSLSGGGTATKKAA
TKKAAAKKAPAKAVAAKKTTAKKTVAKKTPAKKTTATKKTAAKKTTAKKSAAKKTTSKKA
AAKKAPAKKSTAKKAPARKSAARSRTAKKTTARKR
NT seq 648 nt   +upstreamnt  +downstreamnt
gtgaacaaggcgcagctcgttgaagcaatttccgatcagctcggtggacgtcagcaggcc
gcggacgcggtcgacgtcgtactggacgcgattgtccgcgcggtgtgcgcgggcgagcgg
gtgtcggtcaccggcttcggttccttcgagaaggtcgaccggcccgcccgctacgcgcgc
aacccgcagaccggcgagcgcgtacgggtcaagaagacctccgtgccgcgcttccgcgcg
ggccagggattcaaggacctggtcagcggcgcgaagaagctcccgcggaacgacgtggcg
gtcaagaaggcgcccaagggaagcctttcgggcggcggcacggccacgaagaaggccgcc
accaagaaggccgcggcgaagaaggccccggcgaaggcggtcgcggcgaagaagaccacc
gccaagaagacggtcgcgaagaagacccccgccaagaagaccaccgccacgaagaagacg
gcggcgaagaagaccaccgcgaagaagagcgcggcgaagaagacgacgtcgaagaaggcc
gccgccaagaaggcgccggccaagaagagcaccgccaagaaggcgcccgcccggaagtcg
gcggcgcgcagcaggaccgccaagaagacgaccgcccgcaagcgttag

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