Streptomyces phytohabitans: ABXR15_08670
Help
Entry
ABXR15_08670 CDS
T10861
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
spih Streptomyces phytohabitans
Pathway
spih00521
Streptomycin biosynthesis
spih00523
Polyketide sugar unit biosynthesis
spih00525
Acarbose and validamycin biosynthesis
spih00541
Biosynthesis of various nucleotide sugars
spih01055
Biosynthesis of vancomycin group antibiotics
spih01100
Metabolic pathways
spih01110
Biosynthesis of secondary metabolites
spih01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
spih00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
ABXR15_08670 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
ABXR15_08670 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
ABXR15_08670 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
ABXR15_08670 (rfbB)
00525 Acarbose and validamycin biosynthesis
ABXR15_08670 (rfbB)
Enzymes [BR:
spih01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
ABXR15_08670 (rfbB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
NAD_binding_10
NmrA
Motif
Other DBs
NCBI-ProteinID:
XCX49234
LinkDB
All DBs
Position
complement(2139821..2140852)
Genome browser
AA seq
343 aa
AA seq
DB search
MSDPTTPSEGGDVTRLLVTGGAGFIGSHYVRTLLGPDGPGGVRVTVLDKLTYAGTLTNLQ
EVKGHDGFRFVQGDICDAELVDSLAAEHDQIVHFAAESHVDRSILSSTEFVRTNVLGTQV
MLDAALRHGVRSFVHVSTDEVYGSIDEGEWTEEWPLAPNSPYAAAKASSDLLALSYHRTH
GLDVRVTRCSNNYGHHHFPEKVIPLFITNLLDGLPVPLYGDGGNVRDWLHIDDHVQGIER
VRRAGRAGEVYHIGGGTELSNKELTQLLLDACGAGWDMVEHVADRKGHDRRYALDWTKLR
TELGYHPRKDFTTGLAETVAWYRDNRAWWEPLKKNTAAVPLGR
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacccgaccaccccgtccgaagggggcgacgtgacgcgtctcctcgtcaccggc
ggcgccggtttcatcggctcccactacgtgcgcaccctgctcggcccggacgggcccggc
ggcgtacgcgtcacggtgctggacaagctcacgtacgccgggacgctcaccaacctccag
gaggtgaaggggcacgacggcttccgcttcgtccagggcgacatctgcgacgcggagctg
gtcgactcgctcgccgccgagcacgaccagatcgtgcacttcgccgccgagtcgcacgtc
gaccggtcgatcctcagttccaccgagttcgtccgcaccaacgtgctgggcacgcaggtc
atgctcgacgcggcgctgcggcacggcgtacggagcttcgtgcacgtctccacggacgag
gtgtacgggtcgatcgacgagggggagtggacggaggagtggccgctcgcgcccaactcc
ccgtacgcggcggccaaggcgtccagcgacctgctggccctctcgtaccaccgcacccac
ggcctcgacgtccgcgtcacccgctgctccaacaactacgggcaccaccacttcccggag
aaggtcatcccgctgttcatcacgaacctgctggacggcctgccggtgccgctgtacggc
gacggcggcaacgtacgggactggctgcacatcgacgaccacgtgcagggcatcgagcgg
gtgcgccgggccgggcgcgcgggcgaggtctaccacatcggcggcggcaccgagttgagc
aacaaggagctgacgcagctgctgctcgacgcgtgcggcgcgggctgggacatggtcgag
cacgtcgcggaccgcaagggccacgaccggcgttacgccctggactggacgaagctccgc
accgagctgggctaccacccgcggaaggacttcacgaccggcctcgcggagaccgtcgcc
tggtaccgcgacaaccgcgcctggtgggaaccgttgaagaagaacaccgcagccgtcccc
ctgggacgctga
DBGET
integrated database retrieval system