KEGG   Streptomyces phytohabitans: ABXR15_12070
Entry
ABXR15_12070      CDS       T10861                                 
Symbol
casA
Name
(GenBank) type I-E CRISPR-associated protein Cse1/CasA
  KO
K19123  CRISPR system Cascade subunit CasA
Organism
spih  Streptomyces phytohabitans
Brite
KEGG Orthology (KO) [BR:spih00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:spih02048]
    ABXR15_12070 (casA)
Prokaryotic defense system [BR:spih02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-E factors
    ABXR15_12070 (casA)
SSDB
Motif
Pfam: CRISPR_Cse1 Cas3_HD Cas3-like_C_2 Cas3_C DEAD Helicase_C DUF7139
Other DBs
NCBI-ProteinID: XCX49834
LinkDB
Position
2969850..2974544
AA seq 1564 aa
MTKKPTGRTSASTSLSPSTRSAWAKHDRKFDDWLPLWRHLRDSAAVAGKLWEEWLPASVK
RLLAEPLPGGVEDAGRLVRFCAGSHDIGKITPAFACQVEQLAGAMRGNGLDMLTAKQYGQ
DRRLAPHGLAGQVLLQEWMRERFGLTARAAGSLAVVAGGHHGVPPESKQIHDLQLRPRLL
RHPGPSEEAWRVAQFELLDWCMELTDARQVLSSWQEVRLPQPAQVLLTAVVILSDWIASA
PELFPYAPESWQPLGPAGEARRLRAAWQGLDLTSPWRPEVPNGSAQELFAQRFPHLGGVG
LHPVQEEAVRLAREMEPGGLLIVEAPMGEGKTEAALAAAEILAARSGAGGLLLALPTRAT
GDSMFDRLVPWLEALPEDSAGTKEWAVALAHAKAGLQGTWAGMLQAGNRAITAVDPDIGE
RHGVGPSDADRMRRGQRPAGLHAHAWLRGRKKQLLASFTVGTVDQVLFAALKSRHLALRH
LAVAGKVVVIDEVHAYDAYMNRYLDRTLEWLAAYEVPVVLLSATLPAERRRALAAAYAGA
AGAAGVESAADAYPLLTAASPGKEVLTARPAPASGRALDVVLERLEDEPAVLAERLETEL
ADGGCALVVRNTVARVLEAADVLRERFGDDQVTVAHSRFLAADRAANDARLKERYGPGGD
RPERHVVVASQVVEQSLDVSFDLLVTDLAPVDLVLQRMGRLHRHPAARPARLATPRCLVT
GVSDWSAAPPVPVKGSSAVYEGDWTLMRSLAVLGPHLDGAPLRLPEDISPLVQQAYGDEP
TGPEGWSGEMTAAKERHDRLVTAKKRRADGYLLAPVRPAGRPVYGWLEAHAGDADDSSVG
RAQVRDSAETLDVLVVQRTPDGRLITVPWLDGGRGGLELPTDFAPNRQAAEAVAASALTL
PGRFSSHPQVIDRTIAELEQFLVPAWQVRECPWLAGELLLVLDSRCQTRLSGYELSYSRT
EGLRLTEPGLPAAGGGEGMGNEGDGNGAEPRESDSVLPDATSNAADTGEAEVSAAPAGPA
AFNLVRDPWLPAQRLDDGSMLELSLRDAFSRAGEVRRLVGDVPTQEFALLRLALAVLYDA
YGGPETPEAWAELWEAADPFAKVREYLDEHVESFELFDAERPFFQAAGIRTGKDEVAPLS
RIVADVPSGSPLFSMRQPGVGRLSFAEAARWLVHTHAFDVSGIKPAMEGDDRAKAGKVYP
LGVGSLGMLGGVFAEGDTLRETLLLNLVPFERAYAGSGCADSIGSDLPVWRRREPYGARP
RDVGQGGEEPLGLRDLYTWQSRRVRLVADGGAVTGVVLGYGDPLVQQSPWLLEPMTAWRR
SPAQEKKHKRSPYYTTARHDPRRSAWRGLEALLPPGEGGEPERPDEAPRQKIPAVVTWLS
EAFEEVEFEPAKLLRVRTVGIEYGTQQSVIDEIVDDSVVLPSVVLHADNPAFRGAAIDAV
RCADKAVRALGQLAANLVLAAGGDQTDSAAESARDLGFGALDAPYRAWLRELARQPDLTL
SYERWHATVRRRVQRLARQEIRSAGPAATEGRTVDLPGHGRTLLDASRAELWFHASLDKA
LGAS
NT seq 4695 nt   +upstreamnt  +downstreamnt
atgacgaagaaacccactggtcgcacgtcagcctcgacaagcctctccccatcgactcgt
agcgcttgggccaagcacgaccggaagttcgacgactggttgcccctatggcgacatctc
cgcgacagtgcggccgtagccgggaagctgtgggaagagtggcttccggcgtcagtcaag
cgactcttggccgagccattgcccggcggagtagaggacgctgggcgacttgtccgtttt
tgcgctggatcacatgatataggtaagattacgcccgcattcgcctgtcaggtcgaacaa
ttagccggggcgatgcggggcaacggcttggacatgctgaccgccaagcagtacggccag
gaccggcgcctggcccctcacgggctcgcggggcaggtcctgctccaggaatggatgcgg
gaacggttcgggttgacggcgcgggccgcgggctcactggccgtcgtggccggtggacat
cacggcgtgccgcccgagagcaagcagattcacgatctccagctccgcccccggctactg
cggcatccgggcccgagcgaggaggcgtggcgggtcgcgcagttcgagttgctggactgg
tgcatggaactcaccgacgcacggcaggtgttgtcgtcgtggcaggaggttcggctgcct
cagccggctcaggtgctgctgaccgccgtcgtgatcctctcggactggatcgcgagcgca
cccgagcttttcccgtacgcaccggagtcgtggcaaccgctgggccccgccggggaggcc
cggcggctgcgcgcggcgtggcaggggctggacctcacatcaccgtggcggcccgaagtg
ccgaatgggtcggcgcaggagttgttcgcccagcgcttcccgcatctcggtggcgtcggg
ctgcaccccgttcaggaggaagcggtacggctggcacgggagatggagccgggcgggctg
ttgatcgtcgaggcgcccatgggcgaggggaagacggaggcggcactagcggccgccgaa
attcttgcggcccggtccggggcgggaggactgctgctggcgcttccgacccgggccacc
ggggactcgatgtttgaccggctggtcccctggctggaggcgttgccggaagacagcgcg
gggacgaaagagtgggccgtggcgctggctcatgcgaaagccggtttgcagggcacatgg
gccgggatgttgcaagcggggaaccgtgcgatcactgccgtcgatcccgacatcggtgag
aggcacggagtcgggccttcggatgctgaccgcatgcgtcgggggcagcgccctgccggt
ctgcacgcacacgcgtggttgcggggcaggaagaagcagcttctcgcctcgttcaccgtc
ggcaccgtggaccaggtcttgttcgcggcgctgaagagccgacacctcgctctacggcat
ctcgctgtcgcggggaaggtcgtggtcatcgatgaggtccacgcgtacgacgcgtacatg
aaccggtatctggaccggaccttggagtggctggccgcgtacgaggtgccggtggtgctg
ctgtccgcgacgcttcccgccgagcgccgccgagcactcgcagccgcgtacgcgggcgcc
gcaggagcggccggagtggagtcggcagctgacgcgtatccgctgttgaccgccgcctcg
ccgggcaaggaggtcctgaccgcacgcccggcccccgcgtctggacgagcgttggacgtg
gtgctcgaacggcttgaggacgaaccggcggtcctggccgagcggttggagaccgaactc
gccgacggcggctgcgccctcgtcgtacgcaataccgtggcgcgcgtgctggaagccgcc
gacgtgctgcgggagcgcttcggagacgaccaggtgaccgtggcgcactcacggttcctc
gcggcggaccgcgcggcaaacgacgcccgcctgaaggagcgttacggtcccggaggggac
cggcccgaacggcatgtggtcgtcgccagccaggtggtggagcagtcactcgacgtgagt
ttcgacctgctcgtgacggatctggccccggtcgacctcgtgctccagcgtatgggtcgc
ctgcatcgtcatcccgcggccaggcctgcacgcctggccacgccgaggtgcctggtcacc
ggcgtctccgactggagtgccgcgccgccggtcccggtgaaggggtcgagcgccgtgtac
gagggggactggacgttgatgcggtccctcgccgtcctcgggccacatctcgacggggcg
ccgctccggttgccggaggacatcagtccgctcgtgcagcaagcgtacggcgacgaaccc
accggcccggagggatggtccggggagatgacggcggccaaagagcggcacgaccggttg
gtcacggccaagaagcggcgagcggacggctatctgctggcacctgtgcggcctgccggg
cgaccggtctacgggtggctggaagcgcacgcgggcgatgccgacgacagcagcgtcggg
cgtgcccaggtgcgggacagcgcggagacgctggatgttctcgtcgttcagcgaacgccc
gacggacggctgatcaccgtcccgtggctggacggcggcagaggcgggctggaactgccc
accgacttcgcaccgaaccggcaggcggcggaggcggtcgcggcgagcgcactcaccctg
ccggggcggttcagcagccacccgcaggtgatcgatcggaccatcgccgagctggagcag
ttcctcgttcccgcgtggcaggtgagggagtgcccgtggctggcgggggagctgctgctc
gttctcgacagccgttgtcagacccggctgtcaggctacgagttgagctacagccggacc
gaaggactgcggctcacagaacccggcctgcccgcggccgggggtggtgaaggcatgggg
aacgagggagacggcaatggagccgaaccgagggagagtgactcggtcctgcctgacgcg
acgtcaaatgcagcggacacgggtgaggcagaggtgagcgccgcaccggccgggccggcg
gcgttcaatctggtccgcgatccgtggctgccggctcaacggttggacgacggctcgatg
ctggagctgtcgctgcgggatgccttctctcgcgccggtgaggtgcgtcgcctcgtcggt
gacgtgccgacgcaggagttcgctctgctgcggctggctctggccgtgctgtacgacgcc
tacggcgggcccgagacccccgaagcgtgggcggagctgtgggaggcggcggacccgttc
gcgaaggtgcgggaatacctggacgaacacgtggagagcttcgaactgttcgacgcggag
cggccgttcttccaggctgccggcattcgtacgggcaaggacgaggtggcaccgctgagc
aggatcgtcgccgacgtcccctcgggttcaccgctcttctcgatgcggcagcccggagtg
ggtcggctgtcgttcgcagaggcggcccggtggctggtgcacacgcacgccttcgacgtc
tcgggcatcaagccagcgatggagggagacgaccgggccaaggcgggcaaggtctacccc
ctcggggtgggctcactcgggatgctgggcggcgtcttcgcagagggcgacactctgcgg
gagacgctgctgctcaacctcgtccctttcgagagggcctacgcgggcagcgggtgcgcc
gacagcatcgggagcgatcttcccgtatggcgccgcagggagccgtacggcgcccgaccc
cgcgatgtcgggcagggcggggaggagcccctgggcctgcgggacctctacacctggcag
tcgcgccgggtccgcctcgtggccgacggcggcgcggtgaccggcgtcgtgctcggctac
ggggacccgctggttcagcagtccccctggctcctggagccgatgacggcgtggcggcgc
agccctgctcaggagaagaagcacaaacggtccccgtactacacgaccgcacggcacgac
cctcgcaggtcggcgtggcggggactggaagccctcctgccccccggcgagggaggagaa
ccggaacgaccagatgaagctccccggcagaagatcccggccgtggtgacgtggctctcg
gaggcgttcgaggaagtcgagttcgaaccggccaagttgctacgcgtgcggacagtcggc
atcgagtacgggacacagcagtcggtgatcgacgagatcgtggacgattccgtggtcctc
ccctcggtcgtcctccacgccgacaaccctgctttcaggggggccgcgatcgacgccgtg
aggtgtgccgacaaggcggtgagggcgctgggccagttggcggccaacctcgttctcgcc
gccggtggcgaccagacggacagcgccgcggagagcgcacgtgacctggggttcggggca
ttggacgctccgtaccgggcatggttgcgcgagttggcccggcagcccgatctcacgctc
tcgtacgagcgctggcacgcgaccgtacgccgccgcgtccagcggctcgccaggcaggag
atccgatccgccgggcctgccgctacggaagggcgcactgtcgaccttccggggcacggc
cgcacgctgctcgacgcgagtcgggccgaactctggttccacgcaagcctggacaaggca
ctcggcgcatcatga

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