Streptomyces phytohabitans: ABXR15_13820
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Entry
ABXR15_13820 CDS
T10861
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
spih Streptomyces phytohabitans
Pathway
spih00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
spih00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
ABXR15_13820 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
spih01007
]
ABXR15_13820 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spih03016
]
ABXR15_13820 (aspS)
03029 Mitochondrial biogenesis [BR:
spih03029
]
ABXR15_13820 (aspS)
Enzymes [BR:
spih01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
ABXR15_13820 (aspS)
Amino acid related enzymes [BR:
spih01007
]
Aminoacyl-tRNA synthetase
Class II (A)
ABXR15_13820 (aspS)
Transfer RNA biogenesis [BR:
spih03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
ABXR15_13820 (aspS)
Prokaryotic type
Other AARSs
ABXR15_13820 (aspS)
Mitochondrial biogenesis [BR:
spih03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
ABXR15_13820 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
XCX50139
LinkDB
All DBs
Position
3356796..3358568
Genome browser
AA seq
590 aa
AA seq
DB search
MHRYRSHTCGELRSTDVGGDVRLSGWLHNRRNLGGILFLDLRDHYGIVQLVVRPEQTAVH
ELLSGLSKESTVRVDGKVVARGAENVNAELPTGDVEVEVTDVEVLGAADQIPFTINAEDG
VNEERRLEYRFLDLRRERMHRNVMLRSAVISSIRRRMTEQGFNEMATPILSATSPEGARD
FLVPSRLHAGRFYALPQAPQQFKQLLMVAGFDRYFQIAPCFRDEDARADRSPGEFYQLDV
EMSFVEQEDVFRVIEAMMTGIFEEFGEGRHVTSPFPRIPFRESMLKYGSDKPDLRAELEL
VDVSQVFAGSGFKAFADKHVRALAVPDTADQSRKFFDQMGEFAVEQGAKGLAWVRVGDDG
QLTGPIAKFLTEADVAALLAALDAKPGTAVFFGAGEFDEVSKIMGAVRVEAARRTGHFVE
NVFRFCWIVDFPMFEKDEETGKVEFSHNPFSMPQGGLEALETQDPLDVLAWQYDIVCNGV
ELSSGAIRNHEPDVMFKAFGIAGYSREDVEREFGGMLRAFQFGAPPHGGIAPGIDRIVML
LADEPNIRETIAFPLNGNAQDLLMGAPTEVDESRLRELHLSLRKPPAPKA
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgcaccggtaccggtcccacacctgcggcgaactccgttccaccgacgtcggcggcgac
gtccggctgagcggctggctgcacaatcggcggaacctgggcggcatcctcttcctcgac
ctgcgcgaccactacggcatcgtgcagctggtcgtacggcccgagcagaccgccgtccac
gagctgctcagcggcctctccaaggagagcaccgtgcgggtggacggcaaggtcgtcgcg
cgcggcgcggagaacgtcaacgcggagctgcccaccggcgacgtcgaggtcgaggtcacc
gacgtcgaggtgctcggcgcggccgaccagatcccgttcaccatcaacgccgaggacggc
gtcaacgaggagcggcggctggagtaccgcttcctcgacctgcgccgcgagcgcatgcac
cggaacgtgatgctgcgctccgccgtcatctcctccatccgccgccggatgaccgagcag
ggcttcaacgagatggccacgcccatcctgtcggccacctcgcccgagggcgcccgcgac
ttcctcgtgccgtcccggctgcacgcgggccgcttctacgcgctgccgcaggcgccgcag
cagttcaagcagctgctgatggtcgcgggcttcgaccgctacttccagatcgcgccctgc
ttccgcgacgaggacgcgcgcgccgaccgttcgcccggcgagttctaccagctcgacgtc
gagatgagcttcgtcgagcaggaggacgtcttccgcgtcatcgaggcgatgatgaccggg
atcttcgaggagttcggcgagggccgccacgtcacctcgccgttcccgcgcatcccgttc
cgcgagtcgatgctcaagtacggctcggacaagccggacctgcgcgccgagctggaactg
gtcgacgtctcgcaggtcttcgcgggcagcggcttcaaggcgttcgcggacaagcacgta
cgcgcgctggcggtgccggacacggcggaccagtcgcgcaagttcttcgaccagatgggc
gagttcgccgtcgagcagggcgcgaagggcctggcgtgggtgcgggtcggggacgacggg
cagctgaccgggcccatcgcgaagttcctcacggaggcggacgtcgcggcgctgctggcc
gcgctggacgcgaagccgggcacggcggtgttcttcggcgcgggcgagttcgacgaggtc
tcgaagatcatgggcgcggtccgcgtcgaggcggcccggcgtacggggcacttcgtcgag
aacgtgttccgcttctgctggatcgtggacttcccgatgttcgagaaggacgaggagacg
gggaaggtcgagttctcgcacaacccgttctccatgccgcagggcggtctggaggcgctg
gagacgcaggacccgctggacgtcctggcctggcagtacgacatcgtctgcaacggcgtg
gagctgtcgtccggcgcgatccggaaccacgaaccggacgtcatgttcaaggcgttcggc
atcgcgggctactcccgtgaggacgtggagcgcgagttcggcggcatgctgcgggcgttc
cagttcggcgccccgccgcacggcggcatcgccccgggcatcgaccgtatcgtcatgctg
ctggcggacgagccgaacatccgcgagacgatcgccttcccgctcaacggcaacgcgcag
gacctgctgatgggcgccccgacagaggtcgacgagtcccggctgcgggagctgcacctc
tcgctgcggaagcccccggccccgaaggcgtga
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