Streptomyces phytohabitans: ABXR15_15225
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Entry
ABXR15_15225 CDS
T10861
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
spih Streptomyces phytohabitans
Pathway
spih00190
Oxidative phosphorylation
spih03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spih00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
ABXR15_15225
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABXR15_15225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spih03019
]
ABXR15_15225
Enzymes [BR:
spih01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
ABXR15_15225
Messenger RNA biogenesis [BR:
spih03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
ABXR15_15225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase
PP_kinase_C
PP_kinase_N
PLDc_2
DUF3509
Motif
Other DBs
NCBI-ProteinID:
XCX50379
LinkDB
All DBs
Position
3665035..3667473
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AA seq
812 aa
AA seq
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MSQPAVPQPADATGPRTRPQETRSQDSRTGDSRTQDSRTRDSRTGDSRTENAPTPDPRPS
AAARPQPSVGAIAAHRPHAAARPRPDVAGRTAGSGGDGPDLDPDLDSDPDTYEEGRGPDD
ATGDLPAGRFLDRERSWLAFNERVLELAEDPETPLLERANFLAIFASNLDEFFMVRVAGL
KRRIATGVATRSASGLQPRDVLELIWNRSRELMARHAACFQQDIAPALAEEGLHLVRWPE
LTEKEQARLFTLFRQQIYPVLTPLAVDPAHPFPYISGLSLNLAVVVRNPVTGHTHFARVK
VPPLLSRFLEASPQRYVPLEDVIAAHLEELFPGMEVLGHHMFRVTRNEDLEVEEDDTENL
LQALEKELMRRRFGPPVRLEVEESIDPYVLDLLIRELKVRDAEVYPLPGPLDLTGLSGIA
SAMERPDLKYRKFVAGTHRDLAEVESASAPDIFAALRERDVLLHHPYDSFSTSVQAFLEQ
AAADPDVLAIKQTLYRTSGDSPIVDALIDAAESGKQVLVLVELKARFDEQANIKWARKLE
ESGCHVVYGLVGLKTHCKLSLVVRQEGDTLRRYAHVGTGNYHPKTARVYEDLGLLTADPQ
VGADLSDLFNRLSGYSRRATYRRLLVAPSSLRDGLVTRIQREATQHRAGRPAYVRIKVNS
MVDEDVIDALYHASRAGVPVDIWVRGICALRPGVPGLSEHIRVRSILGRFLEHSRVFVFG
NGGDPEVWFGSADMMHRNLDRRMEALVRVTDPAHRASLNGLLDTGTADTTASWHLGPDGD
WTRVAHDADGRPLRNIQETLIDARRRRRAPAT
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgagccagccagccgtgccgcagcccgccgacgccaccggcccccggacccgcccgcag
gaaacgcgctcgcaggactcccgtacgggcgactcccgtacgcaggactcccgtacgcgg
gactcccgtacgggcgactcccgtacggagaacgcccccacgccggacccccgcccgtcc
gccgccgcccgcccccagccgtccgtcggcgcgatcgccgcgcaccggccgcacgccgcc
gcccggccccgccccgacgtcgcgggccgtacggcgggctccggcggcgacgggccggac
ctggacccggacctcgactccgacccggacacgtacgaggagggccgcggccccgacgac
gcgaccggcgacctgcccgcgggccgcttcctggaccgggaacgcagctggctcgcgttc
aacgagcgggtgctggagctggccgaggacccggagacgccgctgctggaacgggccaac
ttcctggccatcttcgccagcaacctcgacgagttcttcatggtccgcgtggccgggctg
aagcgccgcatcgcgacgggcgtcgcgacgcgctccgcgtccgggctccagccgcgcgac
gtgctggagctgatctggaaccgttcgcgggagctgatggcgcggcacgccgcctgcttc
cagcaggacatcgcgcccgccctggcggaggagggcctgcacctcgtccgctggccggag
ctgacggagaaggagcaggcgcgcctgttcaccctcttccggcagcagatctacccggtg
ctgacgccgctggccgtggacccggcgcaccccttcccgtacatctcgggcctctcgctc
aacctcgccgtcgtcgtacggaacccggtcaccggccacacacacttcgcacgcgtgaag
gtgccgccgctgctgtcgcggttcctggaggcgtcgccgcagcggtacgtgccgctggag
gacgtgatcgcggcgcacctggaggagctgttccccggcatggaggtgctggggcaccac
atgttccgggtcacgcggaacgaggacctggaggtggaggaggacgacaccgagaacctc
ctccaggcgctggagaaggaactgatgcgccgccgcttcgggccccccgtacggctggag
gtcgaggagtccatcgacccgtacgtgctggacctgctgatccgcgagctgaaggtgcgg
gacgcggaggtgtacccgctgccgggcccgctggacctgacggggctgtccgggatcgcg
tcggcgatggagcggccggacctgaagtaccgcaagttcgtcgcgggcacgcaccgggac
ctggccgaggtggagtcggcgtcggccccggacatcttcgcggcccttcgcgaacgcgac
gtactgctgcaccacccgtacgactccttctccacgtccgtgcaggcgttcctggagcag
gccgccgccgacccggacgtgctggcgatcaagcagacgctctaccgcacctccggcgac
tccccgatcgtggacgccctcatcgacgccgccgagtccggcaagcaggtgctggtgctc
gtcgagctgaaggcccgcttcgacgagcaggcgaacatcaagtgggcgcggaagctggag
gagtccggctgccacgtcgtctacgggctcgtgggcctgaagacgcactgcaagctgtcg
ctcgtggtccgccaggagggcgacaccctgcgccgctacgcgcacgtcggcaccggcaac
taccacccgaagaccgcccgcgtctacgaggacctggggctgctcaccgccgacccgcag
gtcggcgcggacctctcggacctgttcaaccggctcagcgggtactcccgccgcgccacc
taccgccgcctgctcgtcgcgcccagctcgctccgcgacggcctggtcacccgtatccag
cgggaggccacccagcaccgcgcgggccgccccgcgtacgtccgcatcaaggtcaactcg
atggtggacgaggacgtgatcgacgccctgtaccacgcgtcgcgggcgggcgtaccggtc
gacatctgggtgcgcggcatctgcgcgctccgccccggggtgccggggctcagcgaacac
atccgggtgcgttccatactcgggcgcttcctcgaacactcccgggtcttcgtcttcggc
aacggcggcgaccccgaggtgtggttcgggagcgccgacatgatgcaccgcaacctcgac
cgccgcatggaggcgctggtccgggtcaccgacccggcgcaccgcgcctcgctgaacggg
ctgctggacaccgggacggcggacaccaccgcgtcctggcacctcggccccgacggcgac
tggacgcgcgtcgcccacgacgcggacggacggccgctgcgcaacatccaggaaacgctg
atcgacgcccggaggcgccgacgtgccccggcgacctga
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