Streptomyces phytohabitans: ABXR15_15475
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Entry
ABXR15_15475 CDS
T10861
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
spih Streptomyces phytohabitans
Pathway
spih03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spih00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABXR15_15475 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spih03019
]
ABXR15_15475 (groL)
03110 Chaperones and folding catalysts [BR:
spih03110
]
ABXR15_15475 (groL)
03029 Mitochondrial biogenesis [BR:
spih03029
]
ABXR15_15475 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spih04147
]
ABXR15_15475 (groL)
Enzymes [BR:
spih01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
ABXR15_15475 (groL)
Messenger RNA biogenesis [BR:
spih03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
ABXR15_15475 (groL)
Chaperones and folding catalysts [BR:
spih03110
]
Heat shock proteins
HSP60 / Chaperonin
ABXR15_15475 (groL)
Mitochondrial biogenesis [BR:
spih03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
ABXR15_15475 (groL)
Exosome [BR:
spih04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
ABXR15_15475 (groL)
Exosomal proteins of other body fluids (saliva and urine)
ABXR15_15475 (groL)
Exosomal proteins of breast cancer cells
ABXR15_15475 (groL)
Exosomal proteins of colorectal cancer cells
ABXR15_15475 (groL)
Exosomal proteins of bladder cancer cells
ABXR15_15475 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
CbiA
Motif
Other DBs
NCBI-ProteinID:
XCX50425
LinkDB
All DBs
Position
3717530..3719158
Genome browser
AA seq
542 aa
AA seq
DB search
MAKIIAFDEEARRGLERGMNQLADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIE
LEDSYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVKEGLRNVAAGANPMALKRGIE
KATEAVSAALLEQAKDVETKEQIASTASISAGDTQIGELIAEAMDKVGKEGVITVEESQT
FGLELELTEGMRFDKGYISAYFATDMERMESELEDPYILIVNSKISSVKDLLPLLEKVMQ
SGKALLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAMLGDIAILTGGQVIS
EEVGLKLENAGLELLGRARKVVITKDETTIVDGAGDTEQVQGRVNQIRAEIDNSDSDYDR
EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALLQA
SAVFDKLELEGDEATGAQAVKLALEAPLKQIAVNAGLEGGVVTEKVRNLTPGHGLNAATG
EYVDMLAEGINDPAKVTRSALQNAASIAALFLTTEAVIADKPEKASAGAADPTGGMGGDM
GF
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggccaagatcatcgcgttcgacgaggaggcgcggcgcggccttgagcgcgggatgaac
cagctcgccgacgccgtcaaggtcacgctcggccccaagggccgcaacgtcgtcctggag
aagaagtggggcgcccccacgatcaccaacgacggtgtctcgatcgccaaggagatcgag
ctcgaggactcctacgagaagatcggcgccgagctggtcaaggaggtcgcgaagaagacg
gacgacgtcgccggtgacggcacgacgaccgccaccgtcctcgcccaggcgctcgtgaag
gagggcctccgcaacgtcgccgccggcgccaacccgatggcgctcaagcgcggcatcgag
aaggccaccgaggccgtctccgccgccctgctggagcaggcgaaggacgtggagacgaag
gagcagatcgcctccaccgcctccatctccgccggtgacacgcagatcggcgagctgatc
gccgaggcgatggacaaggtcggcaaggaaggcgtcatcaccgtcgaggagtcgcagacc
ttcgggctcgagctcgagctcaccgagggcatgcgcttcgacaagggctacatctccgcc
tacttcgccaccgacatggagcggatggagtcggagctcgaggacccgtacatcctcatc
gtcaactccaagatcagcagcgtgaaggacctccttccgctgctggagaaggtcatgcag
tccggtaaggcgctgctgatcatcgctgaggacgtcgagggcgaggccctgtccacgctg
gtcgtcaacaagatccgcggcaccttcaagtccgtcgccgtcaaggccccgggcttcggc
gaccgtcgcaaggccatgctcggcgacatcgccatcctcaccggtggccaggtcatctcc
gaggaggtcggcctcaagctggagaacgccggtctcgaactgctcggccgcgcgcgcaag
gtcgtcatcaccaaggacgagaccacgatcgtggacggcgccggtgacaccgagcaggtc
cagggccgggtcaaccagatccgcgccgagatcgacaactccgactcggactacgaccgc
gagaagctccaggagcgcctcgcgaagctggccggcggcgtggccgtcatcaaggccggt
gccgccaccgaggtggagctgaaggagcgcaagcaccgcatcgaggacgcggtgcgcaac
gccaaggccgccgtcgaggagggcatcgtcgccggtggcggcgtggccctgctccaggcg
tccgcggtcttcgacaagctggagctggagggcgacgaggccaccggtgcccaggccgtc
aagctcgcgctggaggccccgctcaagcagatcgcggtcaacgccggtctcgagggcggc
gtcgtcacggagaaggtgcgcaacctgaccccgggccacggcctcaacgccgcgaccggc
gagtacgtcgacatgctggccgagggcatcaacgacccggccaaggtcacgcgctccgcg
ctccagaacgccgcctccatcgcggcgctgttcctcaccaccgaggccgtcatcgccgac
aagcccgagaaggcgtcggccggtgccgccgacccgaccggtggcatgggcggtgacatg
ggcttctga
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