Streptomyces phytohabitans: ABXR15_16275
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Entry
ABXR15_16275 CDS
T10861
Symbol
rfbH
Name
(GenBank) lipopolysaccharide biosynthesis protein RfbH
KO
K13328
dTDP-4-dehydro-2,6-dideoxy-D-glucose 3-dehydratase [EC:
4.2.1.164
]
Organism
spih Streptomyces phytohabitans
Pathway
spih00523
Polyketide sugar unit biosynthesis
spih01100
Metabolic pathways
spih01110
Biosynthesis of secondary metabolites
spih01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
spih00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
ABXR15_16275 (rfbH)
Enzymes [BR:
spih01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.164 dTDP-4-dehydro-2,6-dideoxy-D-glucose 3-dehydratase
ABXR15_16275 (rfbH)
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Motif
Pfam:
DegT_DnrJ_EryC1
Aminotran_5
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
XCX50566
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Position
complement(3906879..3908180)
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AA seq
433 aa
AA seq
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MSDSQEFILELVRKYHREKELQREFVPGKTLVMPSGATLDEDDRVAMVEAALNMRIAVGS
SAIELERQLGRALHRRKVHLTNSGSSANLLALTALTQPEMGDARLKPGDEVVTVAAGFPT
TVNPIIQNGMTPVFVDVELGTYNTTVERIADAIGPRTRAIMIAHALGNPFPAAEVAALAK
EHGLFFVEDNCDAVGSLYNGRMCGTFGDFSTVSFYPAHHLTMGEGGCVTTDRPRLARLIE
SLRDWGRDCWCEPGENDTCGKRYCQQFGGLPYGYDHKYTFSRVGFNLKTTDVQAALGLSQ
LQRLPEFDAARRRNWWRLREGLDGIPGLMMPVPQPGSDPSWFGYILTVEENAGFDRNEIV
GFLESRRIGTRMLFAGNLTRQPAYQGQNYRVSGSLENSDAIMERTFWIGVFPGLTDEMLD
YMIDSLWEFVRSR
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgattcacaggagttcatcctggagctcgtccggaagtaccaccgggagaaggaa
ctccagcgggagttcgtccccgggaagaccctggtgatgccgtccggcgccaccctcgac
gaggacgaccgggtcgccatggtcgaggccgcgctgaacatgcggatcgccgtgggctcc
agcgccatcgagctggaacggcagttgggccgcgccctgcaccgccgcaaggtgcacctg
accaactccggctcgtccgcgaacctgttggccctcacggcgctcacccagcccgagatg
ggcgacgcgcggctgaagccgggcgacgaggtggtgacggtcgcggcgggcttcccgacc
accgtgaaccccatcatccagaacggcatgacgccggtcttcgtggacgtggaactgggc
acgtacaacaccacggtggagcggatcgcggacgcgatcggcccgcgcacccgcgcgatc
atgatcgcgcacgcgctgggaaacccgttccccgccgccgaggtcgccgcgctcgccaag
gagcacgggctgttcttcgtcgaggacaactgcgacgcggtcggctccctctacaacggg
cgcatgtgcggcacgttcggggacttcagcacggtcagcttctaccccgcgcaccatctg
acgatgggtgagggcggctgcgtcaccaccgaccggccgcggttggcccgcctgatcgag
tcgctgcgcgactggggccgcgactgctggtgtgagccgggtgagaacgacacgtgcggc
aagcggtactgccagcagttcggcgggttgccgtacggctacgaccacaagtacacgttc
tcgcgcgtcgggttcaacctgaagacgacggacgtgcaggcggcgctgggcctctcgcag
ctccagcggctgccggagttcgacgcggcgcggcggcgcaactggtggcggctcagggag
ggcctggacggcatccccgggctgatgatgccggtgccgcagccgggcagcgacccgagc
tggttcggctacatcctcaccgtcgaggagaacgccggattcgaccggaacgagatcgtc
gggttcctggagtcgcggcgcatcggcacccgcatgctgttcgcgggcaacctgacgcgc
cagcccgcctaccaggggcagaactaccgcgtgtccgggtcgctggagaacagcgacgcc
atcatggagcgcaccttctggatcggggtcttccccgggctgacggacgagatgctggac
tacatgatcgactccctctgggagttcgtccgcagccgctga
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