Streptomyces phytohabitans: ABXR15_18270
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Entry
ABXR15_18270 CDS
T10861
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
spih Streptomyces phytohabitans
Pathway
spih03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ABXR15_18270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spih03400
]
ABXR15_18270
Enzymes [BR:
spih01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ABXR15_18270
DNA repair and recombination proteins [BR:
spih03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ABXR15_18270
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
HHH_5
AAA_22
NAT10_TcmA_helicase
PhoH
PIF1
TraI_hel_assoc_N
NPHP3_N
AAA_16
UvrD-helicase
nSTAND3
TrwB_AAD_bind
DEAD
TXNDC16_3rd
AAA
SLFN-g3_helicase
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
XCX50903
LinkDB
All DBs
Position
4384125..4386341
Genome browser
AA seq
738 aa
AA seq
DB search
MAFELAVLEGVLERITYANEDNGYTVARVDTGRGGGDLLTVVGSLLGAQVGESLRMEGRW
GSHPQYGKQFTVENYTTVLPATVQGIRRYLGSGLIKGIGPRIAERIVDHFGLDTLDVIEQ
DARKLIEVPGLGPKRTAKIAAAWEEQKAIKEVMIFLQGVGVSTSIAVRIYKKYGDASISV
VRNQPYRLAADVWGIGFLTADRIAQAVGIPHDSPERVKAGLQYALSQSTDQGHCFLPEEQ
LISDAVKLLQVDTGLVIECLGELAGEEEGVVRETVPGPDGQPVTAVYLVPFHRAELSLAA
QLLRLLRTEEDRVPAFRDVDWDAALGWLAGRTGAELAEEQRQAVRLALTEKVAVLTGGPG
CGKSFTVRSVVELARAKKARVVLAAPTGRAAKRLSELTGAEASTVHRLLELKPGGDAAYD
RDRPLEADLVVVDEASMLDLLLANKLIKAVPPGAHLLLVGDVDQLPSVGAGEVLRDLLAD
AGPVPAVRLTRIFRQAQQSGVVTNAHRINSGAPPVTRGLPDFFLFTEDDTEEAGRLTVDV
VARRIPAKFGLDPRRDVQVLAPMHRGPAGAGVLNGLLQQAVTPARPGLPEKRFGGRVFRV
GDKVTQIRNNYEKGANGVFNGTVGVVTGLDADEQRLTVRTDEDEDVPYDFDELDELAHAY
AVTIHRSQGSEYPAVVIPVTTSAWMMLQRNLLYTAVTRAKRLVVLVGSQRALGQAVRTVS
AGRRCTALDHRLSGATAR
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcgaactcgcggtgctcgaaggggtcctggagcgcatcacgtatgccaacgag
gacaacggctacaccgtcgcccgcgtcgacaccggccgcggcggcggcgacctgctgacc
gtcgtcggctcgctgctgggcgcgcaggtgggcgagtcgctgcggatggagggccgttgg
ggctcccacccgcagtacggcaagcagttcacggtggagaactacacgacggtgctgccc
gcgacggtccagggcatccggcgctatctcggctccgggctgatcaagggcatcggcccg
cgcatcgccgagcgcatcgtcgaccacttcggcctggacaccctcgacgtcatcgagcag
gacgcccgcaagctgatcgaggtgcccggcctgggccccaagcgcaccgcgaagatcgcg
gcggcctgggaggagcagaaggccatcaaggaggtgatgatcttcctccagggcgtgggc
gtctccacctccatcgccgtccggatctacaagaagtacggcgacgcctccatctccgtg
gtccggaaccagccgtaccgcctcgctgccgacgtctggggcatcggcttcctcaccgcc
gaccgcatcgcgcaggccgtcggcatcccgcacgacagcccggaacgggtcaaggccggt
ctccagtacgccctttcgcagtcgacggaccagggccactgcttcctgccggaggagcag
ttgatctccgacgcggtgaagctgctccaggtggacaccggcctcgtcatcgagtgcctc
ggtgagctggcgggcgaggaggagggcgtcgtccgcgagaccgtgccgggcccggacggg
cagccggtcacggcggtgtacctggtgccgttccaccgggccgagctgtccctcgccgcg
cagctgctgcggctgctgcgcacggaggaggaccgcgtcccggcgttccgcgacgtggac
tgggacgcggccctgggctggctcgccgggcgtacgggcgcggagctggcggaggagcag
cggcaggcggtgcggctggcgctgacggagaaggtcgcggtgctgacgggcgggccgggc
tgcggcaagtcgttcacggtccggtcggtggtcgagctggcccgcgcgaagaaggcccgg
gtggtgctggcggcgcccacgggccgggcggcgaagcggctgtcggagctgaccggcgcc
gaggcgtccaccgtgcaccggctgttggagctgaagcccggcggtgacgcggcgtacgac
cgggaccggccgctggaggccgatctcgtggtggtggacgaggcgtcgatgctggacctc
ctgctggcgaacaagctgatcaaggccgtgccgccgggcgcgcacctgctgctggtgggc
gacgtggaccagctgccgtcggtgggcgcgggcgaggtgctgcgcgatctgctggccgac
gccgggccggtgcccgcggtgcggctcacccggatcttccggcaggcgcagcagtcgggc
gtcgtcaccaacgcccaccgcatcaactccggtgccccgcccgtcacccggggcctgccg
gacttcttcctgttcaccgaggacgacacggaggaggcgggcaggctgacggtggacgtg
gtggcccgccgtatcccggcgaagttcggcctcgacccccgccgtgacgtgcaggtgctg
gccccgatgcaccgcggcccggcgggcgcgggggtgctcaacgggctgctccagcaggcg
gtgacaccggcgcggccggggctgccggagaagcggttcggcggccgggtgttccgcgtc
ggggacaaggtcacccagatccgcaacaactacgagaagggcgcgaacggcgtcttcaac
ggcacggtgggcgtcgtcaccggcctcgacgccgacgagcagcggctgacggtgcgtacg
gacgaggacgaggacgtgccgtacgacttcgacgagttggacgagctggcgcacgcgtac
gcggtcaccatccaccgttcccagggcagcgagtatccggcggtggtgatccccgtcacg
acgagcgcgtggatgatgctccagcgcaatcttctctataccgccgtcacccgggcgaag
cggctggtggtcctcgtgggctcgcagcgggcgctggggcaggcggtgcgcacggtgtcg
gcgggaagacgctgcacagcgctcgatcaccggctgtcgggtgccacggcccgctga
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