Streptomyces phytohabitans: ABXR15_20285
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Entry
ABXR15_20285 CDS
T10861
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
spih Streptomyces phytohabitans
Pathway
spih03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
spih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
ABXR15_20285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spih03400
]
ABXR15_20285
DNA repair and recombination proteins [BR:
spih03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
ABXR15_20285
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
HC2
Motif
Other DBs
NCBI-ProteinID:
XCX51262
LinkDB
All DBs
Position
4859423..4860577
Genome browser
AA seq
384 aa
AA seq
DB search
MRSIWKGSISFGLVSIPVRVFSATESHSVSFRQVHTADGGRIRYRKVCELDGEEVSGGEI
GKAYETADGTHVQLTDEELASLPLPTAKTVEILAFVPAEDIDPIRLDRSYYLAGDGTSAD
KPYVLLREALSRSGKVAVAKLALRGRESLAMLRVYEDTLTLHLMLWPDEIRSADGMAPGG
GIAVRDAELDLADTLMETLGELDTEDLHDEYREAVEALVAAKEGGTVPEEGVAAPAESTG
TVVDLMAVLENSVQAARQSRGEDGGAATVHELRQQGGTGAGTETGGAGKAAGKRTAAKKA
TGTKSTAKSPAKKAASGSAATKSASKSTGSRSGASGGAKKTAAKKSAAKKTTAKKSASTG
ATSKKSAAGSPARSAAKRTPRKSA
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgcgttccatctggaagggctccatctcgttcggactggtctcgatcccggtccgggtg
ttctcggccacggagagccacagcgtgtcgttccggcaggtgcacaccgccgacggcggc
cgtatccgctaccgcaaggtgtgcgagctggacggcgaggaggtgtccggcggggagatc
ggcaaggcgtacgagaccgccgacggtacgcacgtccagctcaccgacgaggagctggcg
tccctgccgctgcccacggcgaagaccgtggagatcctggcgttcgtacccgccgaggac
atcgaccccatccggctggaccgctcgtactacctggcgggcgacggcacgagcgccgac
aagccgtacgtgctgctgcgcgaggcgctgagccggtccgggaaggtcgcggtcgccaag
ctggcgctgcgcggccgggagagcctggcgatgctgcgggtctacgaggacacgctgacc
ctgcacctcatgctgtggccggacgagatccggtcggcggacgggatggcgccgggcggg
gggatcgccgtacgggacgcggagctggacctggcggacacgctgatggagacgttgggg
gagctggacacggaggacctgcacgacgagtaccgggaggcggtggaggcgctcgtcgcg
gcgaaggagggcggcaccgtgcccgaggagggcgtggcggcgcccgccgagtcgacgggg
acggtcgtggacctgatggccgtactggagaactccgtacaggccgcccggcagtcgcgc
ggtgaggacggcggagcggcgacggtccacgaactgcggcagcagggcggtacgggggcg
gggacggaaacgggcggtgcggggaaggcggcggggaagcgtacggcggcgaagaaggcg
acgggcacgaagtccaccgccaagtcacccgcgaagaaggccgcttcggggtcggcggcc
accaagtccgcgtcgaagtccaccggttcacggtccggcgcgtcgggtggcgcgaagaag
acggccgcgaagaagagcgccgcgaagaagacgaccgcgaagaagtcggcgtccacgggg
gcgacttcgaagaagtccgcggcagggtccccggcgaggtccgccgccaagcgcaccccg
cgcaagtccgcctga
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