Streptomyces phytohabitans: ABXR15_22310
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Entry
ABXR15_22310 CDS
T10861
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
spih Streptomyces phytohabitans
Pathway
spih03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
spih00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
ABXR15_22310 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
spih03011
]
ABXR15_22310 (rpsA)
Ribosome [BR:
spih03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
ABXR15_22310 (rpsA)
Bacteria
ABXR15_22310 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
S1_2
SOGA1-2-like_CC
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
XCX51618
LinkDB
All DBs
Position
5320676..5322196
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AA seq
506 aa
AA seq
DB search
MTSSTETTVTIPQVAVNDIGSEEAFLAAIDETIKYFNDGDIVDGVIVKVDRDEVLLDIGY
KTEGVIPSRELSIKHDVDPNEVVAVGDEIEALVLQKEDKEGRLILSKKRAQYERAWGTIE
KIKEEDGIVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYVGKELEAKIIELD
KNRNNVVLSRRAWLEQTQSEVRQTFLTTLQKGQVRSGVVSSIVNFGAFVDLGGVDGLVHV
SELSWKHIDHPSEVVEVGQEVTVEVLDVDMDRERVSLSLKATQEDPWQQFARTHQIGQVV
PGKVTKLVPFGAFVRVDEGIEGLVHISELAERHVEIPEQVVQVNDEIFVKVIDIDLERRR
ISLSLKQANEAFGADPSVVEFDPTLYGMAASYDDQGNYIYPEGFDPEANDWLEGYEKQRE
EWEQQYAEAQVRFEQHQAQVVKSREADEQAAAEGAVSGSSTPQGGGQSGGGQGGGSYSSE
SSDDSGALASDEALAALREKLAGGQS
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcagcaccgagaccaccgtgaccatcccgcaggttgcggtaaacgacatcggt
tccgaggaagccttcctcgccgcgatcgacgagacgatcaagtacttcaacgacggcgac
atcgtcgacggcgtcatcgtgaaggtcgaccgggacgaggtcctgctcgacatcggttac
aagaccgagggcgtcatcccctcgcgcgagctttcgatcaagcacgacgtcgacccgaac
gaggtcgtggccgtcggtgacgagatcgaggcccttgttctccagaaggaggacaaggag
gggcgcctgatcctctcgaagaagcgtgcccagtacgagcgggcctggggcaccatcgag
aagatcaaggaagaggacggcatcgtcaccggtaccgtcatcgaggtcgtcaagggtggt
ctcatcctcgacatcggcctccgtggcttcctgccggcgtcgctcgtcgagatgcgccgc
gtccgcgacctccagccctacgtgggcaaggagctcgaagccaagatcatcgagctggac
aagaaccgcaacaacgtggtcctttcccgccgtgcctggctggagcagacgcagagcgag
gtccgccagaccttcctcaccaccctccagaagggccaggtgcgctccggcgtcgtctcc
tccatcgtcaacttcggcgcgttcgtggacctcggcggtgtcgacggtctcgtgcacgtc
tcggagctgtcctggaagcacatcgaccacccctccgaggtcgtcgaggtcggccaggag
gtcacggtcgaggtcctggacgtcgacatggaccgcgagcgtgtctccctgtcgctcaag
gcgacgcaggaagacccgtggcagcagttcgcccgtacgcaccagatcggccaggtcgtc
cccggcaaggtcaccaagctggtgccgttcggcgcgttcgtccgcgtggacgagggcatc
gagggtctggtccacatctccgagctggccgagcgccacgtggagatcccggagcaggtc
gtccaggtcaacgacgagatcttcgtcaaggtcatcgacatcgacctggagcgccgccgc
atcagcctctcgctgaagcaggcgaacgaggcgttcggcgccgacccgtccgtcgtcgag
ttcgacccgacgctgtacggcatggccgcgtcctacgacgaccagggcaactacatctac
cccgagggcttcgaccccgaggccaacgactggctggaggggtacgagaagcagcgcgag
gagtgggagcagcagtacgccgaggcgcaggtccgcttcgagcagcaccaggcgcaggtc
gtcaagtcccgcgaggccgacgagcaggcggcggccgagggtgccgtctccggctcctcc
accccgcagggcggcggccagtccggcggcggccagggcggcggctcgtactcctcggag
tcgtccgacgactccggtgcgctggcctcggacgaagcgctggcggcgctccgcgagaag
ctggccggaggccagagctga
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