Sphingomonas piscis: G7077_01005
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Entry
G7077_01005 CDS
T07460
Name
(GenBank) HAMP domain-containing protein
Organism
spii
Sphingomonas piscis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAMP
HAMP_2
Response_reg
HATPase_c
HisKA
GAF_2
DUF5983
GAF
OmpH
Motif
Other DBs
NCBI-ProteinID:
QIK77703
UniProt:
A0A6G7YLT4
LinkDB
All DBs
Position
complement(196580..201949)
Genome browser
AA seq
1789 aa
AA seq
DB search
MNVQAPRDFIDRRQLVTALRALRRGDFSVRLPEEVDGVDGEIASLFNEVVALNQDMTQEF
ERLSQVVGKEGRITQRGRVKNARGGWETALRSVNELIEDMVQPTAEVARVIGAVAKGDLS
QSMTVEIDGRPLRGEFLRIGKVVNTMVEQLASFASEVTRVAREVGTEGKLGGQANVKGVA
GTWKDLTDNVNAMATNLTGQVRNIADVTTAVARGDLSKKITVEVKGEILELKNTINVMVD
QLNGFASEVTRVAREVGTEGKLGGQARVEGVAGTWKDLTDNVNLMADNLTGQVRNIADVT
TAVARGDLSKKITVDVKGEILELKNTINVMVDQLNGFASEVTRVAREVGTEGKLGGQAQV
PGVGGTWKDLTDNVNLMAENLTGQVRNIADVTTAVAKGDLSKKITVEVKGEILELKNTIN
TMVDQLNGFASEVTRVAREVGSEGKLGGQAQVEGVAGTWADLTDSVNLMAGNLTGQVRNI
AEVTTAVAKGDLSKKITVDVKGEILELKNTINTMVDQLNSFASEVTRVAREVGSEGKLGG
QAQVEGVAGTWADLTDSVNLMAGNLTGQVRNIAEVTTAVARGDLSKKITVDVKGEILELK
NTINVMVDQLNAFASEVTRVAREVGTEGKLGGQAQVPGVGGTWKDLTDNVNAMAANLTGQ
VRNIAEVTTAVALGDLSKKITVDVKGEILELKNTINTMVDQLNSFASEVTRVAREVGTEG
KLGGQAQVRGVAGTWKDLTDNVNLMAANLTGQVRNIADVTTAVAKGDLSKKITVDVKGEI
LQLKNTINTMVDQLNGFASEVTRVAREVGTEGKLGGQAKVPGVGGTWKDLTDNVNLMATN
LTNQVRGIAEVVTAVAQGNLKRKLTLDAKGEIAALAETINFMIETLSTFGDQVTNMAREV
GIEGRLGGQARVPGAAGLWRDLTDNVNQLAANLTNQVRSIADVATAVTKGDLTRSIAVEA
SGEMAALKDTINEMIRNLKEQTLKNAEQDWLKTNLARFSRMLQGERDLTTVSNLIMSELA
PLVNAQYGVFYVTKREEEETKLELVASYGAESTDELKREFKLREGLVGQAAADKRPMLLK
KVPSDFIRIGSGLGHSKPANISILPALFEDDVKAVIELASFTEFNETHQTFLDQLMESVG
IVLNTIAATMRTEGLLTQSQLLTQELQARQTELTTKQEELHNTNEELQEKAQLLENEKKQ
VEAKNIEIDMARRAIEEKAEQLALTSKYKSEFLANMSHELRTPLNSLLILSKLLADNQKG
NLDEKQVEFARTINSAGSDLLSLINDILDLSKIESGTVSIEVGEMPVNSLKQHMERTFRQ
LAADKHLDFNVEFDGSLPQSIRTDEKRLQQIVLNLLSNAFKFTSRGSVTLAVRTADKGWS
PTHPVLRNGDKAVAFEVTDTGIGIPEDKQKLIFEAFQQADGTTSRKYGGTGLGLSISREI
ARLLGGELQVRSKPGEGSTFTLFIPLEAAAPVVTSAGTTSARYDNSGAMVPSAMSGAFEV
SDDRDELGDAPFVLIVEDDPTFASILLEAAHEAGLKGVVSTAGAGTLNMARKMQPSAISL
DLGLSDIDGFVLLDLLKHDPQTAHVPIHVISGADKSKSAMNLGAFGVTEKPAEHGELVRV
FGDLLKQAHKAKPKKSKASADTHVPMRPVEELAGAKVLIVDDDIRNIFSLTSVLEAHDVE
VLHAERGKDGIVILEQTPGVDVALIDIMMPDMDGYETMQQIRQRPQLADVPLIAVTAKAM
KGDRQKCLDAGASDYIAKPVDIELLLALLRVWVARAREGSRAPSMQAAE
NT seq
5370 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgtccaggcaccccgcgatttcatcgaccgccgtcagcttgtcaccgcactgcgg
gccctgaggcggggcgatttctccgtccggcttcccgaggaagtggacggcgtcgacggt
gagattgccagcctcttcaacgaggtggtggcgctcaaccaggacatgactcaggaattc
gagcgcctctcccaggtggttggtaaggaaggccgcatcacccagcgcggccgggtcaaa
aacgcccgcggcggatgggagacagcgctccgctccgtcaacgaactcatcgaggacatg
gtgcagccgaccgccgaggtcgcgcgcgtcatcggggcggtcgccaagggcgacctttcc
caatcgatgacagtcgaaatcgacggccgtccgcttcggggcgagttcctgcgcatcggc
aaggtcgtgaacaccatggtggagcagctcgcctccttcgcctccgaagtgacccgcgtg
gcccgcgaagtgggcaccgagggcaagctgggcggccaggcaaacgtgaagggcgtcgcc
ggcacctggaaggacctcaccgacaatgtgaacgcgatggcgaccaacctgacgggtcag
gttcgcaacatcgccgatgtgaccaccgccgtggctcgcggcgacttgtcgaagaagatc
accgtggaggtgaagggcgagatcctggagctcaagaacaccatcaacgtcatggtggac
cagcttaatggcttcgccagcgaagtgacccgcgtggctcgtgaagtgggcaccgaaggg
aagctgggcggtcaggcccgggtggaaggcgtcgccggcacatggaaggatctaaccgac
aacgtcaacctgatggccgacaatctaaccggtcaggttcgtaacatcgcggacgtgact
accgccgtggcgcggggtgacttgtcgaagaagatcaccgtcgacgtgaagggcgagatc
ctcgagctcaagaacaccatcaacgtgatggtggaccagctcaatggtttcgcatccgag
gtgacccgcgtggctcgtgaagtgggtacggaaggaaagctgggtggccaggcgcaggtg
cccggcgtcggcggaacctggaaggaccttaccgacaacgtgaacctgatggccgagaac
ctgaccggccaggtccgtaacatcgcggatgtgacgaccgctgtggccaagggagacttg
tcgaagaagatcaccgtcgaggtgaagggcgaaatcctcgagctcaagaacaccatcaac
accatggtggaccagctcaacggcttcgcatccgaggtgacccgcgtggcgcgcgaagtg
ggttctgaagggaagctgggcggtcaggcgcaggtggaaggcgttgccggcacctgggcc
gacttgacggattcagtgaacctgatggccggtaatctgacgggtcaggtccgcaacatc
gccgaggtgaccaccgccgtggcgaagggcgacctttccaagaagatcaccgtcgacgtg
aagggcgagatcctcgagctcaagaacaccatcaacaccatggtggatcagctgaactca
ttcgcctcggaagtgacccgcgtggcgcgcgaggtgggctcggaagggaaattgggcggt
caggcgcaggtggaaggcgtcgccggcacctgggccgacttgacggactcggtgaacctc
atggccggtaacctgacgggccaggtgcgtaatatcgccgaggtgaccaccgccgtggcc
cgcggcgacttgtccaagaagatcaccgtcgacgtgaagggcgagatccttgagttgaaa
aataccatcaacgtcatggtggaccagctcaacgccttcgcaagcgaggtcacccgcgtg
gcccgcgaagtgggtaccgaagggaagctcggcggtcaggcgcaggtgccgggcgttggc
ggtacgtggaaggatctgaccgacaacgtgaacgccatggccgcgaacttgaccggccaa
gtccgcaacatcgccgaggtgacgaccgcggtggccctgggcgacttgtccaagaagatc
accgtcgacgttaagggcgagatcctggagctcaaaaacaccatcaacaccatggtcgac
cagctgaacagcttcgcgtccgaggtgacccgcgtggccagagaggtcggtaccgaaggg
aagctgggcggccaggcgcaggtgcgcggagtcgccggcacctggaaagacttgaccgac
aacgtgaacctgatggccgccaacctgaccggccaggtgcgtaacatcgcggacgtgacg
accgcggtggccaagggcgatttgtcgaagaagatcaccgtcgacgtgaagggggaaatc
cttcagctcaagaacaccatcaacaccatggtggaccagctgaatggcttcgcatcggaa
gtgacccgcgtggcccgcgaagtgggtacggagggtaagctcggtggtcaggccaaggtg
cctggggtcggcggcacctggaaggatctcacggacaacgtgaacctgatggcgaccaac
ctcaccaaccaggtgcggggtatcgccgaggtggtgaccgccgtggcccaaggtaatttg
aagcggaagctgacgctcgacgccaagggtgaaattgcggcgctggccgaaaccatcaac
ttcatgatcgagacgttgtcgaccttcggcgatcaggtgaccaacatggcccgcgaggtg
ggtatcgaagggcgtctgggtggacaggcgagggtgcccggcgctgccggcctgtggcgc
gacttgaccgacaacgtgaaccagctggcggcgaacctcaccaaccaggtgcgctcgatc
gccgacgtggcgacggccgtgaccaagggcgacttgacccgctccattgccgtcgaggca
tcgggcgaaatggccgcgctcaaggacacgatcaacgagatgatccgcaacctcaaggaa
cagaccttgaagaatgcggagcaagactggctcaagaccaacctcgcgcggttcagccgc
atgctgcagggcgaacgcgatctcacgaccgtgtccaacctgatcatgtcggaactcgcg
ccgctggtgaacgcgcaatacggcgtcttctacgtcacgaagcgcgaggaggaagagacc
aagttggagctggtcgccagctatggggccgaaagcaccgacgagttgaagcgggagttc
aagcttcgcgaaggtctcgtcggtcaggccgcagcggacaagcggccgatgctgctcaag
aaggtgccgtccgatttcatccgcatcggctcaggccttggacactccaagccggcaaac
atcagcatccttccggccttgttcgaagatgatgtgaaggcggtaatcgagctggcctcg
ttcaccgagttcaacgagacccaccagaccttcctcgatcagctgatggaatcggtcggc
atcgtgctcaacacgatcgccgcaaccatgagaacggaaggcctgctgactcagtcgcag
ctgctgacccaggagctccaggcccgtcagaccgagctcaccaccaagcaggaagaattg
cacaacaccaacgaagagctgcaggagaaagcgcagctgctcgagaacgagaagaagcag
gtcgaggcgaagaatatcgaaatcgacatggcgcggcgggcgatcgaggaaaaggccgag
cagctcgcgctgacatcgaagtacaagtccgagttcctggcgaacatgtcccatgagctt
cggacgccgcttaactcactgctgatcctgtcgaagctgctggccgacaaccagaagggc
aatctcgacgagaagcaggtcgaattcgcccggacgatcaactcggccgggtccgacttg
ctgagcctgatcaacgacatcctcgacctgtccaagatcgagtcgggtacggtgtcgatc
gaggttggcgaaatgccggtcaacagcctcaagcagcatatggagcggacgttccgccag
cttgccgccgacaagcatctcgacttcaatgtcgaattcgacggcagcctgccgcaaagc
atccgaaccgacgagaaacgcctgcagcagatcgtgctcaacctgctgtcgaatgccttc
aagttcacctcgagaggcagcgtcaccctggcggtacgcacggctgacaagggctggagc
ccgacccatccggtgcttcgcaacggcgacaaggcggttgcttttgaggtgaccgatacc
ggcatcggcatccccgaggacaagcagaagctcatcttcgaggcgttccagcaagccgat
ggaaccaccagccgcaaatacggcggcacgggcctcggtctgtcgatcagccgcgagatt
gcgcgcctgctcggaggcgagcttcaggtccggtcgaagcccggcgagggctccaccttc
accttgttcatcccacttgaagctgcggcgccggtcgtcaccagcgccgggacgacgtcg
gcccgctacgacaatagcggagcgatggtgccctcggcgatgtcgggcgccttcgaggtc
agcgacgaccgtgatgaattgggcgatgcgccattcgtgctgatcgtcgaggacgatcca
acctttgcgtccatcctgctcgaggccgcacacgaagccggattgaagggcgttgtctcc
accgccggggcaggcaccctgaacatggcgcgcaagatgcagcccagtgccatctcgctc
gatcttgggctgtcggacatcgacggcttcgtgctgctcgaccttttgaagcatgacccg
caaacggcgcacgtgccgatccatgtcatttcgggtgccgacaagagcaagtcggcgatg
aaccttggtgcgttcggcgtcacggaaaagccggccgagcatggtgaactggtgcgggtc
ttcggcgacctgctgaagcaggcgcacaaggccaagccgaagaagagcaaggccagcgct
gacacccacgtgccgatgcgaccggtggaggagctggccggggcgaaagtgctgatcgtc
gacgacgacatccgcaacatcttctcgctgaccagcgttctggaggcgcatgatgtcgaa
gtcctccacgccgagcggggcaaggacggcatcgtcatccttgaacaaacccctggagtg
gacgtggcgctgatcgacatcatgatgcctgacatggacggctatgaaacgatgcagcag
atccgacagcgtccgcagctggccgacgtgccgctgatcgcggtgaccgccaaggcgatg
aaaggcgaccgtcagaagtgcctcgacgccggtgcgtccgactatatcgccaagccggtc
gacatcgagttgctgcttgcgctgcttcgtgtgtgggtggcacgagcccgcgaaggttca
agggcaccaagcatgcaggccgctgaatag
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integrated database retrieval system