Sphingomonas piscis: G7077_05630
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Entry
G7077_05630 CDS
T07460
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
spii
Sphingomonas piscis
Brite
KEGG Orthology (KO) [BR:
spii00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
spii01002
]
G7077_05630
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
spii01011
]
G7077_05630
Peptidases and inhibitors [BR:
spii01002
]
Cysteine peptidases
Family C82
G7077_05630
Peptidoglycan biosynthesis and degradation proteins [BR:
spii01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
G7077_05630
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
Rotavirus_VP3
Motif
Other DBs
NCBI-ProteinID:
QIK78458
UniProt:
A0A6G7YNY7
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All DBs
Position
complement(1148871..1150142)
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AA seq
423 aa
AA seq
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MRKNHYLLIALAASVLATPSMAQRRGDEPIAVPRTIKQGVDFVYVDPQMSNVAKRRQRPQ
NWLQRVFRADFGRSRTQPNPLFLQLAQGLQQYQARWGNLPQTKVPVGAPLKRGMTGPRVK
ALRTRLGLSPQGGYDDALFQAVATYQTVHGLGNADGVAGRATIASLNRGYSHYAKRLAIN
VERAWRLPATRAFDRYVVVDSGAAEAYLYDRDRVVDGMKVVVGSPKTKTPMMAVIMRNAK
ANPYWNVPPELIRSLTAKKVKEQGVSYFKNFHYEVLSDWGPNAKLVDPKTINWKQIAAGK
PTDIRVRQLPGPWNSMGAMKFEMPNDFGIYLHDTPHKELFAKNDRWLSNGCVRLEDWRRF
AGWVFGGVPNGGQLEHEFALPKPVPVYMTYLTVEPSPGNGVVFRPDPYAFDTLAMPQMFG
TAA
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaaaaaccattatctgctgatcgcccttgcggcgtccgttctcgcaacgccgtcg
atggctcagcgccggggtgacgagccgatcgcggttccccgcaccatcaagcagggcgtc
gacttcgtttacgtcgacccgcagatgagcaatgtcgccaagcgccggcagcggccgcaa
aactggctgcagcgggtgttccgcgccgacttcggccgatcgcgcacccagcccaacccc
ttgtttcttcagctcgcgcaggggcttcagcaatatcaggcgcggtggggcaacctgccg
cagaccaaggttcccgtcggtgcaccgctgaagcggggcatgaccggcccccgggtgaag
gcgcttcgaacgcggctgggtctctccccgcagggcggttacgacgatgccttgttccag
gcagtcgcgacctatcagacggtgcacggcctcgggaatgccgatggcgtggcgggccgc
gccacgatcgcgtcgctcaaccgcggctactcgcactatgcgaagcggctcgccatcaat
gtcgagcgggcctggcgccttcccgccacccgcgccttcgaccgctacgtcgtggtcgat
agcggcgccgccgaagcttacctctacgatcgtgaccgggtggtcgacggcatgaaggtc
gtggtcggttcgcccaagaccaagacgccgatgatggccgtcatcatgcgcaacgcgaag
gcgaacccttactggaacgtcccgccggaactgatccgcagcctgacggccaagaaggtc
aaggagcagggggtctcctatttcaagaacttccactacgaagtgctgtccgactggggg
ccgaacgccaagctggtcgatcccaagacgatcaactggaagcagatcgccgccggcaag
ccgaccgacatccgggttcgtcagctgcccggaccgtggaacagcatgggcgcgatgaaa
ttcgagatgcccaacgatttcggcatctacctccacgatacgccgcacaaggaactcttt
gccaagaacgaccggtggctcagcaacggctgtgtccggctggaggactggcgccgcttc
gccggctgggtgttcggcggggtgccgaacggcggtcagctggaacatgagttcgcgctg
cccaagccggtcccggtctatatgacctatctgacggttgagccgagccccggcaacggc
gtcgtgttccggcccgacccctacgcctttgacacgctggccatgccgcagatgttcggc
acggcggcctaa
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