Sphingomonas piscis: G7077_06245
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Entry
G7077_06245 CDS
T07460
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
spii
Sphingomonas piscis
Brite
KEGG Orthology (KO) [BR:
spii00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
G7077_06245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spii03019
]
G7077_06245
03009 Ribosome biogenesis [BR:
spii03009
]
G7077_06245
04131 Membrane trafficking [BR:
spii04131
]
G7077_06245
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spii04147
]
G7077_06245
Messenger RNA biogenesis [BR:
spii03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
G7077_06245
Ribosome biogenesis [BR:
spii03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
G7077_06245
Membrane trafficking [BR:
spii04131
]
SNARE
SNARE associated proteins
Others
G7077_06245
Autophagy
Aggrephagy
Other aggrephagy associated proteins
G7077_06245
Exosome [BR:
spii04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
G7077_06245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_5
AAA_22
CDC48_2
AAA_33
AAA_2
AAA_14
TIP49
IstB_IS21
nSTAND3
AAA_28
NACHT
NPHP3_N
AAA_18
RNA_helicase
Mg_chelatase
AAA_24
DUF815
AAA_30
AAA_11
Sigma54_activat
AAA_7
AAA_19
AAA_3
Vps4_C
AAA_17
ABC_tran
TsaE
Zeta_toxin
NB-ARC
Parvo_NS1
ATPase
bpMoxR
MazE_antitoxin
Motif
Other DBs
NCBI-ProteinID:
QIK78557
UniProt:
A0A6G7YPA1
LinkDB
All DBs
Position
complement(1268806..1271124)
Genome browser
AA seq
772 aa
AA seq
DB search
MADVETVDRTKARKVQVANLSPAEHGRGFARLPARLMSELGLSEGDVIEIVGSKTTAARA
LRPYDEDEGIDIIRLDGLQRANAGVGSGDYVEVRKGQSTAATRVVFAPAAPNMRLEGSSA
ALQRSFAGRPLTEGDVVATTGHQRVNADMPDHIRQLLNAPAFALQELKLIVVSTAPKGIV
HIDAKTQVELLSEYKEPDQADRRADVTYDDLGGMRGTIDALREMVELPLRHPELFQRLGV
DPPKGVLLHGPPGTGKTRLARAVANESAARFFHIAGPEVMGSAYGESEKRLRELFEEAAK
AAPSIIFIDEIDSIAPKRGQVTGEAEKRLVAQLLTLMDGLEPRQNLVVIAATNRPEAIDE
ALRRPGRFDREIVVGVPDEPGRREILGIHTRGMPLDGGVSLEDLSRRTYGFVGADLAALV
REAALEAVRRIMPELDLSEQTIPTEILDRLSVNGSDFENALKRVQPSAMREVMVEAPRVG
WDDIGGLDEARDKLREGVELPLKHPEAFRRIGIRPAKGFLLYGPPGTGKTLLAKAAARES
QANFIATKSSDLLSKWYGESEQQIARLFARARQVAPTIIFFDELDSLVPARGGGLGEPQV
TERVVNTILAEMDGLEELQNVVVIGATNRPNLIDPALLRPGRFDELIYVGTPDTAGRRRI
LAIHTEGMPLAADVDLDSLARRSERFTGADLEDLVRRAGLHALRRGLEEAQVTMADFEAA
LTDTRASVTEQMEEEYARIQSTLKSDAVRPNGGIGFVLPGTMRSRPGGKGDE
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgtcgaaaccgttgaccggaccaaggcccgcaaggtgcaggtggcgaacttg
tcaccggctgagcatggccgcgggttcgcccggctgccggcccggctgatgagcgagctc
ggcctgtcagaaggcgacgtgatcgagatcgtcggcagcaagaccacggcggcgcgagcg
cttcgtccctacgacgaagacgagggcatcgacatcatccgcctcgacggcctgcagcgc
gccaatgccggcgtcggcagcggcgattatgtcgaagtgcgcaagggccagtccactgcc
gcgacccgcgtggtgttcgcgcccgccgcgcccaacatgcggcttgaaggctcgtcggcg
gcgttgcagcgcagcttcgcgggccgcccgctgaccgaaggcgatgtggtcgcgaccacg
ggccaccagcgggtgaatgccgacatgcccgaccatatccggcagctgctgaacgcgccg
gcgttcgcgctccaggagctgaagctgatcgtcgtttcgaccgcgcccaaaggcatcgtc
cacatcgatgcaaagacgcaggtcgagctgctttccgagtataaggaaccggatcaggcg
gaccgccgcgccgatgtcacttacgacgacctcggtggcatgcgcgggacgatcgatgcg
ctgcgtgagatggtcgaactaccgctgcgccatcccgaattgttccagcgtctcggcgtc
gatccgcccaagggcgtgctgcttcacggccctcccggcaccggcaagacccgtctggca
cgcgcggtggcgaacgaaagcgctgcgcgtttcttccacatcgctggccccgaggtgatg
ggttcggcctatggcgagagcgaaaagcgcctccgcgaattgttcgaggaagcggccaag
gcggccccctccatcatcttcatcgacgagatcgattcgattgcgcccaagcgcgggcag
gtgaccggcgaggcggagaaacgcctggtggcgcagctgctgacgctgatggacgggttg
gagccgcggcagaacctggtggtgattgcggcgaccaaccggccggaagcgatcgacgag
gcgcttcggcggccgggccggttcgatcgcgagatcgtggtcggtgttcccgacgagccg
gggcggcgcgagatcctaggcattcacacccgcggcatgccgctggatggaggagtcagt
ctcgaggatctgtcgcggcggacgtacggcttcgtcggcgccgacctggcggcgctggtg
cgggaggcggcgctggaggcagtgcggcggatcatgccggaactcgacctttccgagcag
accattccgaccgagatcctcgacagattgtcggtgaacgggtccgacttcgagaatgct
ttaaagcgtgtgcagccctcggcgatgcgggaggtgatggtcgaagcgccccgcgtcggc
tgggacgatatcggcggtctcgacgaagcgcgcgacaagttgcgcgagggcgtcgaactg
ccgctgaagcatccggaggcgttccgccgcatcggcatccgcccggcaaagggcttcctg
ctttacggcccgcccggcaccggcaagactctgctggcgaaggctgcggcgcgggagagc
caggccaatttcatcgcgaccaaatcgtcggacctgctcagcaaatggtatggcgagagc
gagcagcagatcgcccgcctgttcgcccgcgcgcggcaggtggcgcccacgatcatcttc
ttcgacgaactggacagcctggtgccggcgcgcgggggcgggctgggtgagcctcaggtt
accgagcgggtggtgaacaccatcctggcggagatggacgggctggaggagcttcagaat
gtcgtcgtcatcggcgcgactaatcggccgaacctgatcgatccggcgttgcttcggcca
gggcgtttcgacgagctcatctatgtcggcacgccggacaccgccgggcgcaggcgaatc
cttgccatccacactgaaggcatgccgctggcagcggacgttgatctggattcgctggct
cggcgctccgaacggttcaccggtgccgaccttgaggatctggtccggcgcgccggcctc
cacgcgttgagacgcggactggaggaggcgcaggtgacaatggcggacttcgaggcggcg
ctgaccgatacccgcgcctccgtcactgagcagatggaagaggaatatgcgcggatccag
tcgacgctgaagagcgatgcggtaaggcccaatggtggaatcggcttcgtgctgccggga
acgatgcggtcgcggcccggcggcaagggcgacgagtga
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