Sphingomonas piscis: G7077_10960
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Entry
G7077_10960 CDS
T07460
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
spii
Sphingomonas piscis
Pathway
spii03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spii00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G7077_10960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spii03019
]
G7077_10960
03009 Ribosome biogenesis [BR:
spii03009
]
G7077_10960
Enzymes [BR:
spii01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
G7077_10960
Messenger RNA biogenesis [BR:
spii03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
G7077_10960
Ribosome biogenesis [BR:
spii03009
]
Prokaryotic type
rRNA processing factors
G7077_10960
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
QIK79344
UniProt:
A0A6G7YRI4
LinkDB
All DBs
Position
complement(2153324..2155870)
Genome browser
AA seq
848 aa
AA seq
DB search
MNMRMLIDARHPEETRVAVVKGNRVEEFDFESAEHKQLKGNIYLAKVTRVEPSLQAAFVD
YGGNRHGFLAFSEIHPDYYQIPKADREALLREEAEHAAEEERLRNAHDDDHDHDHSEDGR
DDDGHADEHDDHEDENGEPREGSEEASAGAPRSAVDESAADELRRKRMNLRRRYKIQDVI
QRRQVLLVQVVKEERGNKGAALTTYLSLAGRYCVLMPNTSHGGGISRKISNGADRKRLKT
IMADLNLPSTMGLIVRTAGLSRTKVEIKRDFDYLARLWDEIREKTLGSSAPALIYRDSDL
IKRAIRDLYHRDIDEVLVEGDEGFKAARGFMKLLMPSHVRRVKLHSDSTPMFQRFGVEDQ
LGAMYQPVVQLKSGGYLVINPTEALVSIDINSGRSTREHNIEQTAYNTNLEAAAEIARQL
RLRDMAGLVVIDFIDMEQNSHVRKVEKAMKEALKNDRARIQVGRISSFGLMEMSRQRLRT
GVLEASTKACPHCEGTGLMRTAASAGLSALRMIEDEATRGRGEKICLRAGREAAIYLLNK
KRAELGEIEKRYGVQVEVIIDESLEGARMTVESSGPRPVAQPRPQIAAPVEEEDASLDLA
LEEDEEEEEEEAEDEERSERGEGRRDERHGDEDRNGRRRRRRRRGGRGRSRREGGEEASE
QSDEGAEQPETVADAPERSEAPTEDSGERPRRRRRRGGRGGGEDAPAADAQPDVQPDASP
MIETPVAEEAPVAETAPAEEAKPRTRRRPRARAAEAAAAEPTAEAAPEIAAEAPAAPEAA
EAAPEAPAKKPRARRTKKSEAPVEAAAEAPAETPEAASDAAPVPAADNDSAAEQTGEPRR
GWWQRTFG
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgaacatgcgcatgctgatcgacgcgcgccacccggaggaaacccgggtcgccgtcgtc
aagggcaatcgggttgaagaattcgatttcgaatccgccgagcacaagcagctcaagggc
aatatctatctcgccaaggtaaccagggtcgaaccgtcgcttcaggcggcgttcgtcgat
tacggcggcaatcgccacggctttctggccttcagcgaaatccacccggactattaccag
attccgaaggcggaccgcgaggcgctgcttcgcgaagaggccgaacatgccgccgaggaa
gagcggctacgcaacgcccacgacgacgatcacgatcacgatcacagcgaagacggccgt
gacgatgatggccatgccgacgagcatgacgatcacgaggacgagaatggcgagcctcgc
gagggttcggaagaagcgagcgccggtgctccgcgctcggccgtagacgaaagcgccgcc
gacgaacttcgccgcaagcgcatgaatctgcgccgccgctacaagattcaggacgttatc
cagcgccgtcaggtgctgctggtccaggtcgtcaaggaagagcgcggcaacaagggcgcg
gcgctcaccacctatctcagccttgccggccgctattgcgtgctgatgcccaacacgtcg
cacggcggcggcatcagccggaagatttccaacggtgccgaccgcaagcggctgaagacg
atcatggcggacttgaacctgccgtcgaccatgggcctgatcgtccgcaccgccggcctg
tcgcgcaccaaggtcgagatcaagcgcgacttcgactatcttgctcgcctctgggacgag
atccgggagaaaacgctcggaagcagcgcgccggcgctcatctatcgcgacagcgacctc
atcaagcgtgccattcgcgacctctatcaccgcgacatcgacgaggtgctggtcgagggg
gacgagggcttcaaggccgcgcgcggcttcatgaagctgctgatgccgagccatgtgcgg
cgcgtgaagttgcacagcgactcaactccgatgttccagcgcttcggtgtcgaggaccag
cttggcgccatgtaccagccggtggtccagcttaagtcgggcggctacctcgtcatcaat
ccgaccgaggctctcgtctcgatcgacattaactcgggccggtcgacgcgcgagcataat
atcgagcagaccgcctacaacaccaacctcgaggccgcggccgagatcgcgcgccagctc
cgcctgcgggacatggcaggcctggtcgtgatcgacttcatcgacatggaacagaacagc
catgtccggaaagtcgaaaaggccatgaaggaggcgctgaagaacgaccgcgcgcggatc
caggtcggccgcatctccagcttcggcctcatggaaatgagccgccagcgtctgcgcacc
ggcgtgttggaagcgtccaccaaggcctgcccgcattgcgagggcaccggcctgatgcgc
accgccgcttccgccggcctgtcggcgctgcgcatgatcgaggacgaagccacgcgcggc
cgcggcgagaagatctgcctccgcgccgggcgcgaagccgccatctacctgctcaacaag
aagcgcgccgagctcggcgagatcgaaaagcgctacggcgtccaggtcgaggtcatcatc
gacgagagcctcgaaggcgctcggatgacggtggaaagctccggcccgcgtcccgtcgcc
cagccgcgtccgcagatcgcggccccggtcgaggaagaggatgcaagtctcgacctcgct
cttgaggaagacgaggaagaggaagaggaagaagccgaggacgaagagcgcagcgaacgc
ggtgagggccgccgcgacgagcgtcatggcgacgaggatcgcaatggccgccgtcgccgg
cgtcgccgtcgcggtggccgcggccgctcccgccgtgaaggcggtgaagaggcctccgag
cagtccgatgagggcgccgagcagcctgaaaccgttgcggacgctcccgaacggtccgag
gcgccgacggaagacagcggcgagcgtccgcgccggcgacgtcgtcgcggtggccgtggc
ggcggcgaggatgctccggcagcagacgcgcagcctgacgtccagcccgacgcctcgccg
atgatcgagacgccggtcgccgaggaggcaccggttgccgagacggcacctgcggaggag
gcaaagccgcgcacccgtcgtcgtccccgcgcccgcgccgccgaagcggcggcagccgag
cctaccgctgaggctgcacccgagattgcggccgaagcgccggcagcaccggaggcagcc
gaggcggcgccggaggctccggccaaaaagccgcgcgctcgtcgcacgaagaagtccgaa
gctcctgtcgaagcggctgcggaagcaccggccgagactcccgaagcggcatcggatgcc
gcgccggttcccgcagcggacaatgactcggctgctgagcagaccggcgaaccccgccgc
ggctggtggcagcggaccttcggctga
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