Sphingomonas piscis: G7077_13135
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Entry
G7077_13135 CDS
T07460
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
spii
Sphingomonas piscis
Brite
KEGG Orthology (KO) [BR:
spii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spii03400
]
G7077_13135 (addB)
Enzymes [BR:
spii01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G7077_13135 (addB)
DNA repair and recombination proteins [BR:
spii03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
G7077_13135 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QIK79707
UniProt:
A0A6G7YSI8
LinkDB
All DBs
Position
2572062..2574974
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AA seq
970 aa
AA seq
DB search
MPEPSAQTIHAPTVFTVPAHRSFADALVAGLIGRFGRDPVALASGRILLPNNRAVRTLTE
AFVRASGGGLVLPRLIAIGDPELEERIGGALDPLQEDAGTPPAIDPQVRLFALAKLLDAP
TPAESLRLAADLARTLDALLVNEVDPRRLAEAAADAPELAIHWQISLDRLRAIIDLWPAR
LAEFGRVDGVERRNLLLRGLAKRWESRPPSGFTIAAGITTAAPAVAALLHRVARMPDGMV
VLPALSLATIMPDAEWDALGPDDRGRSEQTHPQYHLKELLDRIGVARGEVRPWPSAGRAS
SPAARSRVVANAMTAADFSDKWNGLPPAHRRLGGVKVAELADPAAEAQAIALAMREALEV
PGRTAALVTPDRTLARRVSALLARWGIDADDSAGRALSETPVGSLLLGIAAVATEELAPV
PLLALLKHPLVGGEGDARRAWLDKVRLLDLALRGPRPAAMLDGLERHIELKEKERGCRGC
LQAWRELKPAVEQLLGWFADTLPVEAFIARLVDAADKLTDGRAWAGPAGRQAADLLADLD
DGQGLILGASDAQPVLRQILDQQSVRPPYGGHPRLFIFGLLEARLQQADLMILGGLNEGV
WPAPPAPDAWLAPKIRANLGLPTLEYRIGLSAHDFASALGAPQVLITRSRRDSKAPTVAS
RFWLRLQAMTGGLLHDVRLERLARGLDDMGQPRPVDRPAPVPTSEQRPRRISVTSVDRLK
ADPFAFYAQEILRVRRLDPVDADHSAAWRGTAVHKVLEDWLREDDCTPDRLEARARALLE
DATIHPMLRALWQPRLMEAIRWIGELEAENRSKGRRPLVAEAKGEAKLGEVIVYGKADRI
DRLADGTLAIVDYKTGQPPRQAAVDAGFALQLGLLGLIARANGFGAVHGKPSAHEYWSLT
KDRDKFGKLACPDAKLGADDFLDHARRHFDDAVARWLSGQEPFTAKLHPAFAPYGDYDQL
MRLEEWYGRR
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaccatcggcgcagacgatccacgcgccgactgttttcaccgtccccgcgcat
cgttccttcgccgatgcgctggttgccggtctcatcggccgcttcggcagggatccggtg
gcgcttgcgagcgggcgaatcctgctccccaacaaccgcgcggttcgaacgctcaccgag
gcctttgtccgcgcaagcggcggagggctcgtcctgccgcggctgatcgcaatcggcgat
ccggagttggaagaaaggatcgggggtgccctcgacccattgcaggaggacgccggaact
ccccctgcgatcgatccgcaggtccggcttttcgcgcttgcaaagctcctggacgcaccc
accccggcggaatcgctgcgcctggccgccgatcttgcgcgcacgctggatgctttgctg
gtcaacgaggtcgatcctaggaggcttgcagaggcggcggcggatgcgcccgaactggcc
atccactggcaaatctcgctcgatcggctgcgcgccatcatcgatctttggccggcacgg
cttgccgaattcgggcgggtcgacggagtggagcggcgtaaccttctgttgcgcggcctt
gccaaacgctgggagagccgcccgccgtcgggctttaccattgccgctgggattacgacg
gccgcacctgcggtcgccgcgctgcttcatcgggtcgcgcgcatgccggatgggatggtc
gtcctgcctgcattgtcactcgctactattatgcccgatgccgaatgggatgcactcggt
cccgacgatcgcggtcgcagcgagcagacccatccgcaatatcacctgaaggaattgctc
gaccgcatcggggtggcgcggggcgaggtccggccctggccgtcggcggggcgggcttca
tcgcccgcggcgcgaagccgcgtcgtggcgaacgcgatgaccgcggccgatttcagcgac
aaatggaacggccttcctcccgcacaccgtaggcttggcggggtaaaagtcgcggagctt
gccgatccggccgcagaggcgcaggcaatcgccctagcaatgcgggaagcgctggaggtg
ccagggcggaccgcggctctggtaacgcccgaccggacgctggcgcgccgcgtctccgct
ttgctcgcccgatggggaatcgacgccgacgacagtgccgggcgcgccttgtcggaaacg
cccgtcggcagcttgctgctcggcatcgcggcagtagcgaccgaggagctggcacccgtg
ccgttactcgccttgctgaagcatccgctggtgggcggcgagggcgacgcgcggagggcg
tggctcgacaaggtgcgattgctcgaccttgcgctccgtgggccacggcccgcagcgatg
ctcgacggcctggaacggcatatcgagctaaaggaaaaggagcggggatgccgcgggtgt
ctccaggcgtggcgagagctcaagcccgcggttgaacaactgctcggctggtttgcggat
acactgccagtagaggcgttcatcgcccgcctggtcgatgcggcggacaagctgaccgac
ggccgcgcctgggccgggccggccggacgccaagctgcggacctgctggcagatctggat
gacggacaaggattgattctgggagcatcggatgcccagcccgtgcttcggcaaattctg
gatcagcaaagcgtccggccgccttatggtggccatcctcgcttgtttatcttcggcctt
ctggaagccaggctgcagcaggcggatctgatgatcctcggcgggttgaacgaaggcgtg
tggccggcaccgccggcgccggacgcgtggctggcaccgaagatccgcgccaatctgggg
ctgccgacgctcgaatatcgtatcggcctgtccgcgcacgatttcgccagcgccttgggc
gctccgcaagtgctgatcacccgctcgcgacgtgacagcaaggccccgaccgtcgcctcg
cgcttctggctgcgcttgcaggcgatgaccggcgggctgctccacgacgtgcggctggag
cgtctggcacgagggctggacgacatgggacagccccggccggtggaccggcctgcaccc
gtaccgacatcggagcagcggccgaggcggatctcggtgacctccgtggaccgcctgaag
gcggatccgttcgccttttacgcgcaggagatcctcagggttcggcggctcgacccggtc
gatgctgatcacagcgctgcctggcggggcacggcagtgcacaaggtgctggaggattgg
ctacgggaggacgattgcacgcccgaccggctcgaagcgcgggcgcgcgccttgctggag
gatgcgaccattcatcccatgctgcgcgccttgtggcagccgcggttgatggaggcgatc
cgctggatcggggaattggaggctgaaaatcggtccaaggggcgccgcccgctggtcgcc
gaagcgaagggtgaggcgaagctcggcgaggtaatcgtctacggaaaagccgatcgtatc
gatcgcttagcagacggaacgctggctatcgtcgattacaagaccggtcagccgcccagg
caagcggcagtggatgcaggctttgcgcttcagctaggcctactgggtcttattgccaga
gcgaacgggtttggagctgttcacggcaagccttcggcgcatgaatattggtcactgacc
aaggaccgcgacaagttcggcaagcttgcctgccccgacgccaagctgggggccgacgac
tttctggatcacgcacgccgacacttcgacgacgcggtcgcgaggtggctgagcggccag
gaaccctttaccgcgaaactccatcccgcctttgcgccttatggcgattacgaccagctg
atgcggctggaagaatggtacggccggcgatga
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