Spirosoma sp. KCTC 42546: EXU85_00950
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Entry
EXU85_00950 CDS
T06164
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K18954
AraC family transcriptional regulator, transcriptional activator of pobA
Organism
spik
Spirosoma sp. KCTC 42546
Brite
KEGG Orthology (KO) [BR:
spik00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spik03000
]
EXU85_00950
Transcription factors [BR:
spik03000
]
Prokaryotic type
Helix-turn-helix
AraC family
EXU85_00950
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
AraC_binding
Cupin_2
HTH_23
Motif
Other DBs
NCBI-ProteinID:
QDK77235
UniProt:
A0A514ZRM1
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Position
220928..221860
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AA seq
310 aa
AA seq
DB search
MENQSIPYYDNLPDFLKAVKSIDTTNRCFGIFPFEQFGGPGEVIPPFRSSTYVAALVTEG
TGTIHLDGVPYQVQPGTLYFLRPWTVRSIHKEDQWHGQVLMFTSEFVTKRSLLSDPMQEY
PFYRKGAQPLIHITSDEVTELASQFELIAAESGHPTRSKADRLDLIYHLLQALLIKSRHT
YRQTLSAIEYSQPVSLVERFQSLLQMYYLPDPNQDAPVLLTVHEAAERLHIHPHYLSDIL
KKYTGKTALQHIRERTAFEAQNLIRNTNLTVAEIGYQLHFDDPSNFTKFFKSITGITPRT
YREQLYALAA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaatcaatcgattccgtactacgataacctgccggattttttgaaggctgtgaag
tcgattgacaccaccaatcgatgcttcggtatttttccatttgagcaatttggcggaccc
ggagaagtaattccaccgtttcgaagtagtacctatgtggccgctctggtaactgaaggg
acgggcactattcacctggatggcgttccttatcaggttcagccgggaacgttatatttt
ttgcgcccctggacagtccgatcaatccataaagaagatcaatggcatggtcaggtactg
atgtttacgtcagaattcgtaaccaagcggtcgttgctttccgatcccatgcaggaatac
cctttttatcggaaaggggctcaaccgttaattcatattacatccgatgaggtaacagaa
ttggccagtcaatttgaactcattgctgccgaatctggtcatccaacgcgttcaaaagcg
gatcgattggatttaatttaccatttgcttcaggcgttgctgataaagagccgccatacc
taccgccagacactttcggccatcgagtattctcaacctgtttcgctggttgagcgtttt
cagagtttgttgcagatgtattacctgcctgatcccaatcaggacgcgccagttttactt
acagttcacgaagcagctgaacgattgcatattcacccccattatctaagcgatatactg
aagaaatacacgggtaaaacggcgctacagcatattcgggagcgaaccgcgtttgaggct
cagaatttaattcggaatacgaatctgactgtagctgagattggttaccaacttcacttc
gatgatccatccaattttaccaaattttttaagagcataacgggcataacaccccggacc
taccgtgagcaactctatgctttagccgcataa
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