Spirosoma sp. KCTC 42546: EXU85_01120
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Entry
EXU85_01120 CDS
T06164
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
spik
Spirosoma sp. KCTC 42546
Brite
KEGG Orthology (KO) [BR:
spik00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spik03009
]
EXU85_01120 (rimO)
Enzymes [BR:
spik01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
EXU85_01120 (rimO)
Ribosome biogenesis [BR:
spik03009
]
Prokaryotic type
ribosomal protein modification factors
EXU85_01120 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QDK77266
UniProt:
A0A514ZRP7
LinkDB
All DBs
Position
265684..266994
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AA seq
436 aa
AA seq
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MKTKGVRTNKINIVTLGCSKNLVDSEVLFTQLKGNGMNVTHESKKDDANIVVINTCGFID
NAKEESINTILRYVDAKEAGIVDKVYVTGCLSHRYKDELEIEMPTVDAWFGTNELPRMLK
TLRADYKHELVGERLLTTPAHYAYLKIAEGCDRPCSFCAIPLMRGGHVSRPMDELVAEAK
SLARRGTKELILIAQDLTYYGLDLYKKRNLADLVNNLADVEGIDWIRLQYAYPSGFPMEV
LDVIRQRPNVCNYLDMPLQTGSTELLKLMRRGITRERTEDLIHAIRDRVPGITLRTTLIV
GHPGETEAMFGETYEFVERMRFDRMGVFTYSHEDDTHSFTMPDDIPADIKQERADELMEL
QQGISQELNQQKVGQTYKVLFDRKEGGYFIGRTEADSPEVDNEVLIPATQYVRLGDFANV
RINRAEDFDLYGEVVS
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaccaaaggagtacgtactaataaaatcaatatcgtcacgctcggttgctcaaag
aaccttgtggattcggaggtgctatttacgcaactcaagggtaacggaatgaatgtgacc
cacgagtcgaaaaaagacgatgccaacattgtcgtgatcaatacgtgtggctttatcgac
aatgcgaaggaggagtcgatcaataccattctccgctatgtagatgccaaagaagcgggt
attgtcgataaagtgtacgtaacaggttgcctgtcgcaccgttacaaagatgaactcgaa
atcgagatgccaaccgttgatgcctggtttggtaccaacgaactgccccggatgctgaaa
acccttcgcgccgattataaacacgaactcgttggtgaacgattactgacaacacccgct
cattacgcttacctgaaaattgctgaaggctgtgatcggccctgctcgttctgtgctatt
ccactgatgcggggaggtcatgtatcgcgcccaatggatgaactggtggcagaagcaaaa
tcattggcccggcgaggtactaaagagctgattctgattgcccaggatttaacttactat
ggtttagacctgtacaaaaagcggaaccttgctgatctggtcaataatcttgccgatgta
gagggaatagactggattcggttgcagtacgcttacccatcaggctttcccatggaagta
ctggatgtaatccgccaacgaccaaacgtttgtaattatctggatatgccgttgcaaacc
ggctcaacagagttgctgaagctcatgcgccggggtataacccgtgagcgaaccgaagac
ttgattcatgccattcgtgatcgggtgcctggtataaccctccgtacgaccctgattgta
ggacacccaggcgaaaccgaagccatgtttggggagacctatgagtttgtggaacggatg
cgttttgaccggatgggcgtgttcacctactcccatgaagatgatacccactcatttacc
atgcccgatgatattccagcggacatcaaacaggagcgggccgatgagttaatggagctg
caacagggtatttcacaggagctgaatcagcagaaagttgggcaaacatacaaggtactg
tttgaccggaaggagggtgggtatttcattggtcgcactgaagcggactcgccggaagta
gacaatgaggtacttattccagccacccaatacgtccgacttggcgattttgccaatgtg
cgaattaatagggctgaggattttgatttatacggagaggtagtctcctga
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