Spirosoma sp. KCTC 42546: EXU85_02055
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Entry
EXU85_02055 CDS
T06164
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
spik
Spirosoma sp. KCTC 42546
Pathway
spik00061
Fatty acid biosynthesis
spik00071
Fatty acid degradation
spik01100
Metabolic pathways
spik01212
Fatty acid metabolism
spik02024
Quorum sensing
spik04146
Peroxisome
Module
spik_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
spik00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
EXU85_02055
00071 Fatty acid degradation
EXU85_02055
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
EXU85_02055
09145 Cellular community - prokaryotes
02024 Quorum sensing
EXU85_02055
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
spik01004
]
EXU85_02055
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spik04147
]
EXU85_02055
Enzymes [BR:
spik01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
EXU85_02055
Lipid biosynthesis proteins [BR:
spik01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
EXU85_02055
Exosome [BR:
spik04147
]
Exosomal proteins
Exosomal proteins of breast milk
EXU85_02055
Exosomal proteins of breast cancer cells
EXU85_02055
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
QDK77441
UniProt:
A0A514ZS80
LinkDB
All DBs
Position
480251..481954
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AA seq
567 aa
AA seq
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MNTKSTLSLYPWRRFYPKGVPEEINPDAYPSLAALLEEGCRRFTDRPAYACMGKQITFGE
LEMLSAQFASFLQNDLGLQKGDRLAIQMPNTLQYPVAMFGALRAGLAVVNTNPLYTPREM
QHQFKDSGAKAIVILSNFASNLEKIIDRTDIQHVVITQLGDLLGFPKKQIVNAVVKYVKK
LVPAYKLPEAISFNDALSRGRTQPFKPVAIQNTDLAFVQYTGGTTGVSKGAMLTHRNIIS
NVEGQHYWMKPGGVPEGEGIIVAALPLYHVYALTTNALAALKSGDMNLLITNPRDMNTFI
DDLKKYKITAFTGVNTLYNGLLNNPRIGEVDFSHLKVTSAGGMALQTSVAERWAKLTGNT
PCEGYGLTETSPVLCSNPIDGTVRVGTIGIPWPSTEMKIIREDGTDAPIGEAGEIVARGP
QVFKGYYNRPEETAQSMMGDWFKTGDVGVMNEDGFFKIVDRKKDMILVSGFNVYPNEIED
VVAQCPGVLEVACIGVPDEKSTEVVKIFVVKKDLNLTTEAIKEFCRENLTPYKVPRVIEF
RTELPKSNVGKILRKPLRDEELAKLKK
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgaatacgaaatcaaccctaagcctatatccctggagacgcttttatcccaaaggagtc
ccggaagaaattaatccggatgcttacccatcattggctgcccttttagaagagggttgt
cgtcgatttacggatcgccctgcttatgcatgcatgggtaaacagatcacatttggtgaa
ttagagatgctatccgctcagtttgcatcgtttttgcaaaatgatctgggcctccagaaa
ggggatagactggctatccagatgcccaatacgctacaatatccagtagctatgtttggt
gctttgcgggcaggtttggccgtagtcaatacgaacccgctttataccccccgagaaatg
cagcaccagttcaaagactcgggcgcaaaagccattgtgatactgtccaattttgccagt
aatctggaaaaaatcatagaccgtacagacattcagcatgttgtaatcacacagttgggc
gatttgctgggctttcccaaaaagcagatcgtcaatgccgtggttaagtatgtcaaaaaa
ctggtgcctgcttataagctgcctgaagctatatcgttcaatgatgccttgagccgggga
cgtacgcagccctttaagccagtagccattcagaatacggatctggcgtttgttcagtat
acgggtggcacaacaggcgtttcgaaaggggctatgctgacccatcggaacatcatatcc
aacgtagaagggcagcactactggatgaagccaggtggtgtacccgaaggtgaaggcatc
attgtggctgcattgcctctttatcatgtatacgccttgacaacgaacgcattagcggct
ttgaaaagcggggatatgaacctgctcattaccaatccccgcgatatgaatacattcatt
gacgatctgaaaaaatataaaattacggcctttacgggggtcaataccctttataatggc
ctacttaacaacccacgcattggtgaagtcgattttagccatctgaaagttacctcggct
ggaggtatggccctgcaaacatcggtggccgaacgttgggctaaacttacggggaatacg
ccctgcgagggctatggacttactgaaacgtcgccggtactgtgctcaaaccctattgat
ggtaccgtgcgtgttggaacgattggtattccctggcccagtacggagatgaaaattatt
cgcgaagatggtactgatgcgcccatcggtgaagccggtgagattgtggctagaggcccg
caggtatttaagggatattataatcgccctgaggaaacggcccagtctatgatgggtgat
tggtttaaaaccggcgatgttggtgtgatgaacgaagacgggttctttaagatcgttgac
cgaaaaaaggatatgatcttggtatcgggcttcaatgtgtacccgaacgaaattgaggat
gttgtagcccagtgtccaggtgtgctggaagtagcctgtataggtgttcccgacgaaaaa
tcgacagaagtagtcaaaatttttgtcgtaaagaaagatctaaatctcactactgaggct
atcaaagaattctgccgcgagaatctaactccctacaaagtgccccgcgttattgagttc
cggacggagttgcctaagtcgaacgtaggtaaaatcctgcgtaaaccccttcgtgacgaa
gaactggcgaagttgaagaaataa
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