Spirosoma sp. KCTC 42546: EXU85_02320
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Entry
EXU85_02320 CDS
T06164
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
spik
Spirosoma sp. KCTC 42546
Brite
KEGG Orthology (KO) [BR:
spik00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
spik01002
]
EXU85_02320
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
spik01011
]
EXU85_02320
Peptidases and inhibitors [BR:
spik01002
]
Cysteine peptidases
Family C82
EXU85_02320
Peptidoglycan biosynthesis and degradation proteins [BR:
spik01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
EXU85_02320
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Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
Motif
Other DBs
NCBI-ProteinID:
QDK77493
UniProt:
A0A514ZSD7
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Position
complement(535172..536299)
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AA seq
375 aa
AA seq
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MSVLRNLIVLFLLLPLLSTAQTSDDWTRLRQYGNEIGVDSLCPSPDVACLTTYFTQIVYG
KPPRRISYQGLHEQLDTVRINQLTQQFLAGTDWCPLLDSLESHDRNYRQLKEYCMRCLVD
DYMADSLTIEQVKTTLNTYRWLNRFPAEKRVVINIPSASMRVIDRQGSTLLNSRVIVGKA
STPTPCFTAQLTDIVTYPYWNVPRSIAIKELLPQIRKNPATVLAEMNLQIIDSKGRIVHP
DSVNWSGNLAKTFPYRLRQSTGCDNALGVLKFTINSPFDIYLHDTNQRSLFAHEKRALSH
GCIRVEKPIELANLALGSSRFNPSFLTTCQKQNSPKTIHLPHPIPVIITYNLLDIDETGA
IVVNRDVYNWSQIDL
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttctacgcaacctgattgtcctctttttgctacttcctctattgtctacagcc
caaaccagcgacgactggacccgcctgcgtcaatatgggaacgagatcggtgtagatagt
ctttgtccgtcgcccgatgtggcttgcctgacaacttattttacacaaattgtttacggg
aagcccccccggcgaatcagctatcagggcctgcatgagcaacttgatacggtacgaata
aaccaacttactcagcagtttctggctggaactgattggtgcccactgctagattcactg
gaatcacatgaccgcaactaccggcagctaaaggaatactgtatgcgctgcctggttgac
gactacatggccgattcgctaactattgaacaagtcaaaacgacactcaacacttaccgc
tggctaaaccgctttcccgccgaaaaacgggtcgttatcaacattccctcggcctccatg
cgggtcattgaccggcaagggtctacgctgctgaacagtcgggtaattgttggcaaagcc
agcacaccgactccctgttttacggcacagctcaccgacatcgtaacgtacccctattgg
aatgtgccccgctcaattgcgatcaaagaactgctgccgcaaattcggaagaacccagct
accgtactggccgaaatgaatctacagatcattgactcgaagggaagaatcgtccatcca
gattcggtaaactggtcaggaaatctggcaaaaacctttccttatcggcttcggcaatcg
actggctgcgataacgccctgggtgtactgaaatttacgatcaacagccccttcgacatt
tacctgcacgataccaatcagcggtctttgtttgcccacgagaaacgagcactcagtcac
ggttgtatccgggttgaaaagcccattgagctagccaatcttgccctgggatcatcgcgc
ttcaatccttctttcctaaccacctgtcaaaaacagaacagtccgaaaaccattcacctg
ccgcaccccattcccgttattattacctacaacctgctcgatatcgacgaaacaggtgcc
attgtggttaatcgggacgtatataactggagtcagattgacttatag
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