Spirosoma sp. KCTC 42546: EXU85_04740
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Entry
EXU85_04740 CDS
T06164
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
spik
Spirosoma sp. KCTC 42546
Pathway
spik00061
Fatty acid biosynthesis
spik00071
Fatty acid degradation
spik01100
Metabolic pathways
spik01212
Fatty acid metabolism
spik02024
Quorum sensing
spik04146
Peroxisome
Module
spik_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
spik00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
EXU85_04740
00071 Fatty acid degradation
EXU85_04740
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
EXU85_04740
09145 Cellular community - prokaryotes
02024 Quorum sensing
EXU85_04740
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
spik01004
]
EXU85_04740
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spik04147
]
EXU85_04740
Enzymes [BR:
spik01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
EXU85_04740
Lipid biosynthesis proteins [BR:
spik01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
EXU85_04740
Exosome [BR:
spik04147
]
Exosomal proteins
Exosomal proteins of breast milk
EXU85_04740
Exosomal proteins of breast cancer cells
EXU85_04740
BRITE hierarchy
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Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
QDK77933
LinkDB
All DBs
Position
complement(1161107..1162789)
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AA seq
560 aa
AA seq
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MSTSNTTQPGSRPFIDYFYKWEREKADQVYLRQPVGDSYIDYTWAEVGRQARSMASYLRS
LDLPPQSPIGLVSKNCPHWLIADIAILISGHISVPFYPTLTADQLQSVLEHSQCTVLFVG
KVDNWDTMRMGIPANVLCIAFPDNQPDFALRSWNEILDTYPPMVDSPKPTLDDLFTIIYT
SGTTGTPKGVMLDYRAAAHIAESARAKTFQDLPNARFFSYLPLCHVAERNIVEAIGLITG
GTIYFVESLATFGKNLAAARPTHFLAVPRIWTKFQQGVLASMPQSRLSRLLRIPVVSSLV
KRKIRQRLGLNDTVMILTGAAPTPIPLIRWFRQLGICIQENYGMTENLGAVSMMPADRIK
DGTVGRVNDGMNVRIDPATGEILTQGAWNMRGYYRDPALTAKTLTADNWLHTGDVGELDA
DGYLRITGRLNDLYKSPKGEFINPTKLEFGFSENQLVDQICVIGAQLPQPIALLVLSDIG
QKTPPTDVVKSLTDTLTNLNSQLPAYERLKKIILVKDAWTVDNNLMTPTLKIKRKEVEKR
YQSLINAWYEQDEVITWEAS
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccagcaacacaacgcaacccggcagcaggcctttcattgattacttctacaaa
tgggagcgcgagaaagccgatcaggtgtatctgcggcaacccgttggcgatagttatatc
gactacacctgggcggaggtgggcaggcaggctcgctcgatggccagctatctgcgttcg
ctcgatctgcccccacaaagtcccattgggctggtctctaaaaactgtccccattggctt
attgccgacattgcgattctcatcagcggccatatttccgttccgttttatcccacctta
acggccgaccaactccagtcggtactggaacacagccagtgtacggtgttgtttgtggga
aaagtagacaactgggatactatgcggatgggtatacccgctaatgtgctgtgcatcgct
tttcccgacaaccagcccgattttgccctgcgttcctggaatgagattctggacacctat
ccgcccatggtcgacagtccgaaaccgacgctggatgacctattcacgattatttatacc
tctggcacaacgggcactcccaaaggggttatgctcgactaccgggctgctgcccacatt
gccgaatcagcccgagccaaaacattccaggatttaccaaatgcccgttttttttcgtac
ctccccctttgccatgtggctgaacggaacattgtcgaagccattggcctgatcacgggg
ggtactatttactttgttgaatcgctcgccacctttggcaaaaatctggcggcagcccgt
ccaactcattttctggccgtgccccgcatctggacaaaatttcagcagggtgttctggcc
agtatgccccaatccagattgagcaggttgcttcgtatacccgtcgtatccagcctggtt
aagcgaaaaatccgtcagcgattggggcttaacgataccgtcatgattctgaccggggcc
gctcctactccgattccactgattcggtggtttcggcaattggggatctgtattcaggaa
aactacggcatgacggaaaatctgggggccgtttccatgatgccagccgatcggatcaag
gatggaaccgtagggcgggtcaacgacgggatgaacgttcggattgatccggctaccggc
gaaatcctcacccagggtgcctggaatatgcggggatactaccgcgatccagcgctaacc
gccaaaacgctgacggccgataactggctccatacgggcgacgtcggggaacttgacgcc
gacggttatctccgaattacgggccgactcaacgacctgtacaagagcccaaaaggtgaa
ttcattaatcccacaaaactggaattcggctttagtgagaatcaactcgtcgatcaaatc
tgcgtaataggtgcccagttgcctcagcctattgccttgctggtactttcggacattggc
cagaagacgcccccgaccgatgtagtcaaaagcttgaccgatacgctaacaaacttgaat
agccagctaccagcctatgagcgcctgaagaagatcattctcgttaaggacgcctggacg
gtagacaacaacctgatgacacccaccctgaaaatcaagcgcaaggaggtcgagaaacgc
taccagtcattgatcaacgcctggtatgagcaggacgaggttattacgtgggaagccagt
taa
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