Spirosoma sp. KCTC 42546: EXU85_04895
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Entry
EXU85_04895 CDS
T06164
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K02005
HlyD family secretion protein
Organism
spik
Spirosoma sp. KCTC 42546
Brite
KEGG Orthology (KO) [BR:
spik00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
EXU85_04895
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Motif
Pfam:
BSH_RND
HH_CzcB
RND-MFP_C
YknX_C
BSH_CusB
CzcB_C
BSH_YknX
BSH_YhbJ
BSH_CzcB
Biotin_lipoyl
HH_EMRA
BSH_LcnD
HH_YBHG
HH_MFP_RND
HH_AprE
CPxCG_zf
NonGDSL
PspA_IM30
HEPN_Toprim_N
Motif
Other DBs
NCBI-ProteinID:
QDK77962
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Position
complement(1220790..1222037)
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AA seq
415 aa
AA seq
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MDRVLPKRFWTVQRLAIFGGGAVVLGLLAYTLFFADRRSKLNVEKDKITVSAVSTGPFED
FIAVTGVVQPLKTIRLDAIEGGYVTQKLIEGGNMVKKGEVLLKLENQSLKLSFLQSETEA
NRLVNDLQTTRQRLQVERFTLRKTLADLDAQIDQAKDSYDRQAKLYKDKVVSEEDYLKAK
RAYERLTGQRTIEIETQKYQEENAKFQIKQLEGTLQRTQKNVALWQQTLDNLVVKAPVSG
QLSSIDVEVGSNINRGQNIGQIDDLNGFKMRVGIDEHYISRVFSGLKGSFEFNGKMHDLE
ISRVYPEVKSGRFEVDMIFPKGTPEGIKRGQSSPIQLELGKAAKATLLPVGGFFSDTGGN
WVYVVDKSGKRAVKRPITLGRKNPEFYEVLTGLEPGEQVITSSYENFGDNEVLEF
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcgtcttacctaaacgattttggactgtccaacgcctagctatcttcgggggc
ggtgcggtggttctaggcttattagcttacaccctcttctttgccgaccgtcggtcgaag
ttgaacgttgaaaaagataaaataaccgtctccgctgtatcaacggggcctttcgaagat
tttattgccgtaaccggtgttgtacaaccgctgaaaacgatccggctcgatgctattgaa
gggggttatgtaacgcagaaactaattgaagggggtaacatggttaagaaaggagaagta
ctcctgaaactcgaaaaccagagcctgaaactaagcttcctccagtcagaaaccgaagct
aaccgacttgtcaacgacctacaaaccacccgccaacgccttcaggtagagcgctttacc
ctccgaaaaacgttagccgacctcgatgctcagatcgatcaggcaaaggactcctacgat
cggcaggctaagctgtacaaggacaaagtcgtttcggaagaagattatctgaaagccaaa
cgcgcttatgaacggctaactggtcagcgtaccattgagatcgaaacccagaagtaccag
gaggagaatgcaaagttccagatcaaacaattggaaggcaccttgcaacgtacacagaaa
aatgtggctctttggcaacagacactggataacctggttgttaaagcccccgtttcgggt
cagttgtccagcattgatgtggaagttggctcaaacatcaaccggggccagaacatcggc
cagattgatgacctgaatggtttcaaaatgcgcgtcggtatcgatgaacactacatcagc
cgggtgttttcaggactgaaaggctcttttgaattcaacggaaaaatgcacgatctggaa
atcagccgggtctatcctgaagtaaaaagtggtcggtttgaagtggacatgatctttccg
aagggaacgcccgaagggatcaagcggggtcagtcatcgccgattcagttggagttaggt
aaggccgccaaagcgacgctgctgcccgtaggtggtttcttctccgacaccggcggtaac
tgggtatacgtagtggataaatcaggcaaacgcgctgtgaaacgtccgatcacacttggc
cgcaaaaaccctgagttctacgaagtcctgaccggactggaacccggcgagcaagttatt
acgagttcttacgaaaattttggtgataacgaagtgttggaattttag
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