Spirosoma sp. KCTC 42546: EXU85_10945
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Entry
EXU85_10945 CDS
T06164
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
spik
Spirosoma sp. KCTC 42546
Pathway
spik03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spik00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EXU85_10945 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spik03019
]
EXU85_10945 (groL)
03110 Chaperones and folding catalysts [BR:
spik03110
]
EXU85_10945 (groL)
03029 Mitochondrial biogenesis [BR:
spik03029
]
EXU85_10945 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spik04147
]
EXU85_10945 (groL)
Enzymes [BR:
spik01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
EXU85_10945 (groL)
Messenger RNA biogenesis [BR:
spik03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
EXU85_10945 (groL)
Chaperones and folding catalysts [BR:
spik03110
]
Heat shock proteins
HSP60 / Chaperonin
EXU85_10945 (groL)
Mitochondrial biogenesis [BR:
spik03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
EXU85_10945 (groL)
Exosome [BR:
spik04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
EXU85_10945 (groL)
Exosomal proteins of other body fluids (saliva and urine)
EXU85_10945 (groL)
Exosomal proteins of breast cancer cells
EXU85_10945 (groL)
Exosomal proteins of colorectal cancer cells
EXU85_10945 (groL)
Exosomal proteins of bladder cancer cells
EXU85_10945 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
KH_PARP14_2
Pho88
Motif
Other DBs
NCBI-ProteinID:
QDK79093
UniProt:
A0A514ZX13
LinkDB
All DBs
Position
complement(2738608..2740245)
Genome browser
AA seq
545 aa
AA seq
DB search
MAKKIFFDTEARERIKKGVDTLADAVKVTLGPKGRNVILDKKFGSPVITKDGVTVAKEIE
LKDAMENMGAQLVKEVASKTADSAGDGTTTATVLAQAIYSIGAKNVAAGANPMDLKRGIE
KAVLAVVKNLSEQAQTIGDDFGKIEQVATISANHDEEIGKMIAEAMKKVGKEGVITVEEA
RGTETEVKTVEGMQFDRGYLSPYFVTNTEKMEVELERPFILISEKKVSSMKELLPVLEQV
AQTGRPLLIIAEDVDGEALATLVVNKIRGALKVAAVKAPGFGDRRKAMLEDIAILTGGQV
ISEERGFKLENASIEYLGQAEKILIDKDNTTIVNGVGEKENISGRVNQIKAQIENTTSDY
DREKLQERLAKLSGGVAILYIGAATEVEMKEKKDRVDDALHATRAAVEEGIVTGGGIALI
RAISSLDGITTINEDEKTGVNIIRVALESPLRTIVANAGGEGSVIVNKVKDGQGGFGYNA
KNDTFEDLFAAGVIDPKKVTRLALENAASIAGLLLTTECVIADEPEEAPAGGGHGHPGGG
MGGMM
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggctaagaaaatatttttcgatactgaagctcgtgagcgcattaagaagggtgttgac
accctggccgacgcggtgaaagttaccctcggtcctaaaggccgcaacgttattcttgat
aagaaattcggctcacctgtaatcaccaaagatggtgtaacggtggccaaagaaattgaa
ctgaaagacgccatggaaaacatgggcgctcagttggtaaaagaagttgcttcgaaaacc
gctgattcggctggtgacggaacaactaccgctactgtattggcacaggcgatctactcg
atcggtgcgaaaaacgtagcggctggtgctaacccaatggatttgaagcgtggcattgag
aaagctgttctggctgttgttaagaacctttcggagcaagctcaaaccatcggtgatgac
ttcggcaaaattgaacaagtggctaccatctcggctaaccatgacgaggaaatcggtaaa
atgattgccgaagccatgaagaaagtaggtaaagaaggtgttatcacggttgaagaagct
cgcggtaccgaaacggaagttaaaaccgtagaaggtatgcagttcgaccggggttacctg
tcgccatacttcgtaacgaacaccgagaaaatggaagttgaactggagcgtccgttcatc
ctgatttcggaaaagaaagtttcgtcgatgaaagagttgctgcccgtacttgagcaggtt
gctcaaacaggccggcctctgttgatcatcgctgaagatgttgatggcgaagctctggct
acgctggttgttaacaaaatccgtggtgccctgaaagtagctgctgttaaggctcctggc
ttcggcgatcgccggaaagctatgctggaagacatcgctatcctgacaggtggccaggtt
atcagcgaagagcgcggcttcaaacttgaaaacgcatcgatcgaatacctgggtcaggct
gaaaaaatcctgatcgacaaagacaatacaactattgttaacggtgttggcgagaaagaa
aacatttctggtcgcgtaaaccagatcaaagcccaaatcgaaaacacgacatcagactac
gatcgcgagaaattgcaggagcgtctggccaaactgtcgggtggtgtggctattctctac
atcggtgctgctaccgaagtagaaatgaaagaaaagaaagatcgtgttgacgatgcgctg
catgcaacccgtgctgctgttgaagaaggtatcgtaacgggtggcggtatcgccctgatc
cgtgctatctcttcgcttgacggtatcacaacaatcaatgaagacgaaaaaaccggtgtt
aacatcatccgtgttgccctcgaatcacctctacgtacgattgtagctaacgccggtggc
gaaggttcagttatcgtgaacaaggtgaaagatggtcagggtggatttggttacaacgcc
aagaacgatacattcgaagatctgtttgccgctggtgtaatcgatcctaagaaagtaacg
cgtcttgctctggaaaacgcagcatcgatcgctggtctgttattgacgaccgagtgtgtt
attgctgacgagccagaagaagctccagctggtggcggtcatggtcacccaggcggtggc
atgggcggcatgatgtaa
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