Spirosoma sp. KCTC 42546: EXU85_16280
Help
Entry
EXU85_16280 CDS
T06164
Name
(GenBank) bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase
KO
K01798
Alr-MurF fusion protein [EC:
5.1.1.1
6.3.2.10
]
Organism
spik
Spirosoma sp. KCTC 42546
Pathway
spik00300
Lysine biosynthesis
spik00470
D-Amino acid metabolism
spik00550
Peptidoglycan biosynthesis
spik01100
Metabolic pathways
spik01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
spik00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
EXU85_16280
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
EXU85_16280
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
EXU85_16280
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
EXU85_16280
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
spik01011
]
EXU85_16280
Enzymes [BR:
spik01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
EXU85_16280
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
EXU85_16280
Peptidoglycan biosynthesis and degradation proteins [BR:
spik01011
]
Precursor biosynthesis
Amino acid ligase
EXU85_16280
Racemase
EXU85_16280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Mur_ligase_M
Mur_ligase
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
QDK80081
LinkDB
All DBs
Position
4008159..4010702
Genome browser
AA seq
847 aa
AA seq
DB search
MKTKNLQLINRQWFTDSRQVTGNATDAVFFAIQGEHHDGHNFIGELYQKGVRQFVVERSA
LTPERRTEFIAYADATFIEVDSSLQTMQTLAAEHRKRVQIPIIGITGSNGKTIVKEWLAQ
LLDGGQSPDEYVVVKSPKSYNSQLGVPLSVHQLTDKHTLGIFEAGISKVHEMQSLEAIIR
PTIGIFTNIGTAHDEGFRTRKQKIAEKLRLFIHANTLIYCSDYTDIDEEVHLLLKAVNPT
MNVITWSLNGKPATYQGKLQHDQLTLTSKEGTAIQLKLPFTDPASVENLMHCLVTLLTLH
PWTTEALQARLNRLRPVSMRLEQKEGINNCVLIDDSYNNDVAGLQLALSFLNQQSTRPRR
VVILSDVLQSGQAEHDLYEQVGTLIRTNAIDQFIGIGPVLSRNAHFFADSSLFFATTDAF
LTQFPFHELRDSSVLVKGARPFSFERIVARLERKVHGTVLDINLDALTHNLNYYRDKVGS
DTKLMVMVKAFAYGSGSTEVAQLLQFHRVDYLAVAYADEGIALRQNGIELPIMVMNPAPE
TFDALLAYNLEPELYSMRILREWGRFVQGAGSMERGAGGKEQGDGSDLNPAPRSMPSAKT
SLHLKIDTGMHRLGFLETELAEVANYLKGHDNLHVATVFSHLVGSDDARFNSFSTQQYET
FLRSTAILEAALGYRPTRHLLNSAGIVRFPDYKLDMVRLGIGLYGVEASGINQAALQTVG
TLRTVISQIKTVRAGESIGYSRRGVLDHEARIATLAIGYADGFDRRLGNGVGQVWVNGTR
CPTVGNVCMDMTMIDVTSAVASEGDDVIIFGPDLPITELAKQMDTIPYEILTGVSERVKR
VFFKEGN
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacgaagaatttgcagttaataaatcgtcagtggtttaccgattcccggcaagtg
acagggaatgctacggacgctgttttttttgccatacagggcgaacaccatgatgggcac
aactttattggggagctttaccagaaaggtgtaagacagtttgtggtggaacggtcggcg
ctgacacccgagcgccgaacggaattcattgcgtatgccgatgcaacgttcattgaggtc
gatagtagtctgcaaacaatgcaaacactggccgctgaacatcggaaacgggttcaaatt
ccgattattggcattacagggagcaacggcaaaaccatagttaaggaatggctggctcaa
ttactcgatggagggcagtcgccggacgagtatgtggtcgttaaaagtcccaagagctat
aactcgcaactgggagtaccgctgtcggttcaccaacttaccgataagcataccctggga
atttttgaggccgggatttccaaggtccatgagatgcaatcgctggaggctattatccga
ccaacaattggcatttttaccaacataggcacggcccatgatgaggggttccggacccgg
aaacagaaaatagccgaaaagctccggctatttattcacgccaataccctcatttactgt
tccgattacaccgatattgacgaagaagtacatctgctgctcaaagcggtcaatccaact
atgaacgtcattacctggtcgctgaatgggaaaccggctacgtatcagggtaagttgcag
catgaccaattgaccttgacaagcaaagagggtacggctattcagctaaaattacccttt
acagaccctgcttcggtggagaatctgatgcattgtctggtaacgctcctgacgctgcat
ccctggactaccgaggccctgcaagcccggttgaatcgccttagaccggtttcaatgcgg
ctggaacagaaagagggtatcaataactgtgtactgattgacgattcgtataataatgac
gttgctggcttgcaactggcgctcagttttctcaatcaacagagtacccggcctcgtcgg
gtggtcattctgtcggatgtactacagtcgggtcaggccgaacacgatctgtatgaacag
gttgggacactgatccgcaccaatgcaattgaccaatttattgggattggcccggtcctg
agtcggaatgctcatttttttgctgattccagtttattcttcgcgaccacggatgccttt
ttaactcagttcccattccacgaactgcgcgacagttctgtattagtaaaaggggcaagg
ccgttctccttcgagcggattgtggcccgcctggagcggaaagtccacgggactgttctt
gacataaatctggatgcgctgacgcataacctgaactattatcgggacaaagtagggtcc
gacacgaagctgatggtcatggtgaaggcttttgcctatggcagtggcagtacggaagtg
gcacaactcctgcaatttcaccgggtcgattacctggcggttgcctacgccgacgaaggg
atagcgcttcggcaaaatgggatcgagctacccatcatggtgatgaatcctgcccctgaa
accttcgatgcgctgctggcgtacaacctggagcctgaactgtacagcatgcggattttg
cgggagtggggtaggtttgtgcagggagcggggagcatggagcggggagcagggggcaag
gagcagggagatgggagcgacctaaaccctgctccgcgctccatgccctctgccaaaacc
tccctgcacctgaaaattgacaccggtatgcatcggctggggtttctggaaacggagctg
gcagaggtagcgaactacttgaaaggccacgataatctgcatgtggcaacggtgttcagc
catttggttggttccgatgatgcccggttcaatagtttctcaacgcagcaatatgaaacc
tttctgcgaagtacagctatactcgaagcggctttaggctaccgtccaacgcgccatctg
cttaactcggccggtattgtacgctttccggactataaactcgatatggttcgcctgggt
attggtctatacggagttgaagccagtgggatcaatcaggcggctttacagacggttggc
acccttcgaacggtgatcagtcagatcaaaaccgttcgggcaggggagtcgatcgggtat
agccggcggggagtgcttgatcatgaagcccgcatcgccaccctggccatcggttatgcc
gacggtttcgatcgtcgactgggcaatggcgttggtcaggtttgggtaaatggaacgcgc
tgtccaaccgttggcaatgtgtgcatggatatgaccatgatcgacgtcacgtcggcagtg
gcttcggaaggggatgacgtcataatttttggtcctgatctacccattacggaattggca
aaacagatggacacaattccgtatgagatcctgacgggtgttagtgaacgggtaaaacgg
gtgtttttcaaggagggaaactaa
DBGET
integrated database retrieval system
