Spirosoma sp. KCTC 42546: EXU85_21985
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Entry
EXU85_21985 CDS
T06164
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
spik
Spirosoma sp. KCTC 42546
Pathway
spik03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
spik00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EXU85_21985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spik03400
]
EXU85_21985
DNA repair and recombination proteins [BR:
spik03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EXU85_21985
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EXU85_21985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
AAA_21
nSTAND1
DnaJ_CXXCXGXG
SMC_N
AAA_29
AAA_16
DUF4350
RsgA_GTPase
Anti-TRAP
Motif
Other DBs
NCBI-ProteinID:
QDK81139
UniProt:
A0A515A2R5
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Position
5354445..5357102
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AA seq
885 aa
AA seq
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MARRTNANDQDDKTTSGFVRVRGAREHNLKNIDVSIPRNQLVVFSGVSGSGKSSLAFGTL
YAEAQRRYLESVSPYARRLIDQVGVPDVDAIDGLPPAVALQQQRGTPNARSTVGSLTTLS
SLVRMLYSRVGTYPPRQTMLYAEDFSFNTPQGACPRCHGMGRVHTMTEASMVPDPSLTIR
QRAIAAWPTAWGGQNLRDILVSLGYDIDIPWKDLPKKDRQWILFTDEQPTVPVYAGLTPA
QTRQAQRLKMEPSYQGTFSSAKRNLEHTLAHTDSAAMRKRVLQFMISSPCPVCQGKRLKP
EALSVTFAGYDIADLSHLSLDQLADVIKPAANGEFAADRNSSTSLVSRQAAKAALDTRVQ
AGGSAHKGAPDVRRTDDLSPEKRIAAERLCGDLLDRLTTLIELGLGYLSLDRSTPTCSSG
ELQRLRLATQLSSQLFGVIYVLDEPTAGLHPADGHALFDALDRLKASGNSLFVVEHDVEL
MRRADWLVDVGPEAGSAGGRILYSGEPQGLRQVSESRTRPYLFEETARLAPPNRPPQGWL
RLEGVRRNNLQGVTVSFPLGCFTAVTGVSGSGKSSLVSQSLLDLVAAHLGMRREEAEEDT
LENTPTEKTIGQLGGNVKAIQRLIEVDQKPIGRTPRSNLATYTGLFDQVRKLFAATPEAR
RRHFDAGRFSFNVAKGRCPTCEGEGQVSIELLFMPSVYAPCPTCHGTRYNEKTLEINWNG
KSIADVLGMTVEEACLFFAQEALVLRSLDTLRDIGLGYLKLGQSATELSGGEAQRIKLST
ELQRTQRGTTLYVLDEPTTGLHPRDVDRLLVQLNRLVDAGNTVIVVEHDMRTVAQCDWVI
DVGPGAGNHGGTIVAAGTPAEIAVCQASHTAPFLANILKPELSPP
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atggctcgacgaacaaacgccaacgaccaggacgataaaacaacatccggatttgtccgc
gtgcggggggctcgtgagcacaacctcaaaaatatcgacgtctccataccacgcaatcag
ctggtggttttcagcggtgtttctggctcgggcaagtcgtccctggctttcggcaccctc
tatgccgaagcacagcgacgctatcttgaatcggtttccccctatgccagacggctcatc
gatcaggtcggcgtgccggatgtcgatgccattgacggcctgccacccgccgttgccctc
cagcagcaacgcggcacgcccaatgcccgctcaacggtaggtagtctgacgacactctcg
agcctggtgcgtatgctctactcgcgcgtgggtacgtaccccccccggcagacgatgctc
tatgctgaggatttttccttcaacaccccccagggggcttgtccccgttgtcatggcatg
ggccgcgtgcataccatgaccgaagcgtcgatggttcccgatccgtcgctgaccattcgc
cagcgggccattgctgcttggcccacggcctggggcggtcagaacctgcgcgatatttta
gtctcgctgggctatgacatcgacataccctggaaagacctgcccaaaaaagaccgacag
tggattctctttacggacgagcagccgacggttcccgtctatgcgggcctcaccccggcc
caaacgcgtcaggctcagcgactgaagatggaaccgagctatcagggaaccttcagcagc
gccaaacgaaatctggagcacacgctggcccataccgacagtgccgccatgcgcaaacgc
gtgttgcagtttatgatcagtagcccctgcccggtatgccagggcaagcgcttaaagccc
gaggccctttcggttaccttcgccggttacgacatcgctgatctttcgcatctctccttg
gaccaactagcagacgtcatcaagcctgccgcgaatggtgagtttgccgccgacaggaat
tcgtcaacgtcgctggtgagtcgccaggcggccaaagctgcgctggatactcgtgtgcag
gccggtggctcagcgcacaagggtgcccctgatgtgcgccgtaccgatgatctctcgccg
gaaaagcgcatcgctgccgagcgcctgtgcggtgatctgctggatcgcctgacaacgctc
attgagttgggcctgggttatctgtcgcttgaccgcagtacgcccacctgctcatccggt
gagttacagcggctgcggctggccacccaactttcctcccagctttttggggtcatctat
gtgctggacgagccgacagccgggctgcacccggccgatggccacgcgctcttcgacgcc
ctggacaggctcaaagcgtcgggtaactcgctcttcgtggtcgaacatgacgttgagttg
atgcgccgtgccgattggctcgttgatgttggccctgaagcaggcagcgcgggcgggcgc
attctctacagtggagaaccacaaggccttaggcaggtcagcgagtcccgcacccggccc
tacctgtttgaggaaacagcccggctggcgccccccaaccgtccccctcaaggctggcta
cgtctggaaggagtccgacgaaataatcttcagggggtgaccgtttcgtttccgttgggt
tgctttactgccgtgaccggtgtctcgggctcgggcaaatccagcctggtgagccagtct
ctgctggatctggtggcagcgcatctgggaatgagacgggaagaggctgaggaagatacg
ctggaaaatacccccaccgaaaaaaccattggtcaactggggggcaatgtcaaggccatc
cagcgcctgattgaggtggatcaaaaaccaatcggacgaaccccacgctccaacctggcc
acctataccgggctttttgatcaggtccgcaaactctttgccgccacaccggaggcccgt
cggagacacttcgatgccggccgtttttccttcaacgtcgccaaagggcggtgcccaacc
tgtgagggcgaaggccaggtcagcatcgagctgctgttcatgccgagcgtgtatgccccc
tgtccgacctgtcatggcacacgctataacgaaaagacgctggaaattaactggaacggc
aaatccattgcggatgtgctgggcatgacggttgaagaagcctgcctgttttttgctcag
gaagcgttggtgttgcggtccctcgacacgctacgggatattggcctgggctatctcaag
cttgggcaaagcgcgaccgagctttccggcggggaggcccagcgcatcaagctctccacc
gaactgcaacgcacgcaacggggcaccaccctctacgtgttggacgagccgaccaccggc
ctgcatccgcgtgatgtcgaccgtcttttggttcagctgaaccgcctggttgatgcgggc
aataccgttatcgtcgtcgagcatgatatgcgtacggtggcccagtgtgattgggttatc
gacgtgggacccggagcgggaaatcacggcggcacgatcgttgcggcaggcacacccgct
gagattgccgtgtgtcaggcaagccacacggctcctttcctggcgaacatcctgaagcca
gagctaagtcccccctaa
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