Spirosoma sp. KCTC 42546: EXU85_24270
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Entry
EXU85_24270 CDS
T06164
Name
(GenBank) TonB-dependent receptor
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
spik
Spirosoma sp. KCTC 42546
Brite
KEGG Orthology (KO) [BR:
spik00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spik02000
]
EXU85_24270
Transporters [BR:
spik02000
]
Other transporters
Pores ion channels [TC:
1
]
EXU85_24270
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plug
TonB_dep_Rec_b-barrel
CarbopepD_reg_2
CarboxypepD_reg
STN
TTR_TEN1-4
FecR_C
MetallophosN
Motif
Other DBs
NCBI-ProteinID:
QDK81554
UniProt:
A0A515A403
LinkDB
All DBs
Position
complement(5875537..5879001)
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AA seq
1154 aa
AA seq
DB search
MMKTLPHRSYLRWFMRLTFIPFLLLISVMGSLIARPVHGQNPLKRTVSLSIANQSVETIL
ERLEKIADVQFAYSFELIKADRKASLTVKNERLEKVLNELLTPLQIDYSVTGPRLILLKP
RSGEAVLPPSSDFRASLAPETPASVDKVVTGTVLDEKSQPIPGVNLVVKGTQTGTTTDAQ
GNFRITVADDQAVILFSSVGYLGQEVAVGNRTTLTVTLQDDNKSLSEVVVVGYGSQKKSD
LTGAVSTITAKDISRLPVAGIDQALQGKSSGVRVTQSTGAPGEGVAVRIRGVGTINDNSP
LFIIDGVPTKDAFSVLNPADIESMSVLKDASSAAIYGARAANGVIVVTTKRGKSGAPRVT
FNAYTGIQQHGRLIPMANSQEYINIYNEAATNDNASITNPSLQRQLIPSTLQVADTDWQK
AIFRTAPIQNYQLSVSGGTDKSHYLLSANYFDQQGIILNSSYKRYALRASIDTEIARKVK
IGTNLNITYSQRSIVGSSGDGYGGNGGSIVRYALFRTPAIPVYDQNGDYADLPQFPAFFG
DGYNPVGLAQKQDNKEQQYRVFGDIFGEWQILKGLRFRTDAGLDLNIVNRKTYNENWGTN
NRINSPSTLVNRFSPASTITWNNTLNYDITIGENHQITALAGTEAIHSVSRDVGGSDRNF
IDQVSNLRYLGQGADITGRQSFESDSRWSLFSLFGRVNYAFRDKYLASVNVRRDGSSRFS
PTNRYANFFSGSAGWNIDREEFFQPLSRTISLLKLRASIGQLGNQDIGNYPYASLVGSGY
NYVFGASPQTVAGYAVVTRGNSNVKWESSTQTDVGLEMGFLQNKLQITADYFIKRTSDIL
VPIPVPKSGGSAAAPYVNAGQVENRGLELDLIFRYKKGAFSYDISANASFIHNKVLSLSE
GRPIPGGRIDNGVFGTLTEPGYPIGSFYLLQQDGIFQNEGQIFTSAFQGNNIKPGDVRFK
DMNGDGLINQLDRSHVGSPIPTLTYGLTANLQWKNFDLSAFFQGVSGNKIYYQVATDIEG
FYRAFNVTQRVVDDHWHGEGTSNTQPRVSWSGSANNKQPSTRFLEDGAYTRLKNLQLGYT
LPSTLTKKLGSSTIRVYVSGQNLLTFTKYPGLDPEQQSSDNVNNEQFKGDVAVGIDWGTY
PSAKTYTVGLNVSF
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaaacgctaccccatcgttcgtacctccgctggtttatgcgactaacttttatc
ccgttcctgttgctcatcagcgtcatgggcagcctgattgcccgacccgttcatggccaa
aatccactgaaacgaaccgtaagcctgtcaatagcaaaccagtcggtcgaaacgattctg
gaacggctggagaagattgccgatgtgcagtttgcctacagcttcgagcttattaaagcg
gatcggaaggccagcctgacggtcaaaaatgagcgtctggaaaaggtgctgaacgagtta
ctaacacctctccagatcgactactccgtaaccggtccacgactgatcctgctgaaaccc
agatccggtgaggccgtgctgccaccctcgtccgacttccgggcctccctggcccccgaa
accccagcgagtgtcgataaggtggttacgggaaccgttttggatgagaaaagtcagccc
attccgggtgtcaacctggtggtgaaaggaacccagaccggtaccaccaccgatgcccag
ggtaattttcggattacggtggccgacgatcaggccgttatcctgttctcttccgtcggg
tatctggggcaggaggtggcagtgggtaatcgaacaaccctgactgtcactttgcaggac
gataataaatcgctgtcggaagtggtggtggtgggctacggatcgcaaaaaaaatcggat
ctgacgggggcggtttcgacgattacggctaaagacatcagtcgcctgcctgtggcgggt
atcgatcaggcattacagggaaaatcatcgggcgttcgcgtgacccagtcaacgggtgct
ccgggcgaaggggttgctgtccggattcgcggggtgggaacgatcaacgataatagcccg
ctgtttatcattgacggtgtaccaaccaaagatgccttcagcgtactaaaccctgccgat
attgaaagcatgtcggtgctgaaagatgcctcttcggcggctatttatggcgcacgtgcg
gccaacggcgtgattgtggtgacgaccaaacgcggcaaaagtggtgcccctcgggtaacg
tttaatgcgtataccggtattcagcaacacggtcggttgattccgatggccaactcccag
gagtacatcaacatctacaacgaagcggctaccaacgacaacgcgtcaattaccaatccg
agcctgcaacgccagttgattccgagtacgcttcaggtggccgataccgattggcagaaa
gccatttttcgtacggctcccattcagaactatcaactgtcggttagtggaggcaccgac
aagtcgcattacctcctgtcggccaattacttcgatcagcagggtatcattctcaattcg
agctacaaacgctacgcactccgggccagcatcgatacggagattgcccgaaaggttaaa
attggaaccaacctgaatatcacctattcgcagcgcagtattgtggggagttcgggcgat
gggtacgggggcaacggcggcagcattgttcggtatgcgctgttccggacgcccgccatt
ccggtgtacgatcaaaacggcgactatgccgatctgccccagttcccggccttctttggc
gacggctacaacccggttgggctggcgcagaaacaggataataaagaacaacagtatcgg
gtgttcggggatatttttggggagtggcaaatcctgaaagggctacggtttcggaccgat
gccgggctcgacctgaacatcgtcaaccggaaaacctataacgaaaactggggcaccaac
aatcggatcaatagcccctccacactcgtcaaccggtttagtccggctagtacgattacc
tggaacaacaccctgaattatgatatcacgatcggtgaaaaccaccagataacggcgctg
gcgggtaccgaagccattcacagcgtcagtcgcgatgtgggcggttccgaccggaatttc
attgatcaggtgagcaacctgcgttacctcggtcagggggccgacattaccgggcggcag
tcgttcgaaagcgattcccgctggtcgctgttctcgctgtttggacgcgtcaactacgcg
tttcgggataaatacctggcatcggtcaacgttcgtcgcgatggatcgtcgcgcttctcg
cctacgaaccgatacgccaatttcttctcgggttcggcaggctggaacatcgaccgggag
gagttttttcagcccctgtcccgcacgatttccctgttgaaactacgggcgagcatcggt
caactggggaatcaggatatcggtaactatccctacgcttcgctggtaggtagtggatac
aactatgtattcggggccagtccacaaactgtagcgggttatgccgttgtgacgcgggga
aactccaacgtaaaatgggagtcgtcgacccaaaccgacgtgggcctggaaatggggttt
cttcagaataaactccagatcaccgccgactatttcatcaaacgaacctccgatattctg
gttccaatcccggttcccaaatcgggcggtagtgcggctgctccctatgtcaatgcgggt
caggtggagaaccgtggcctggagttggacctgatttttcgctataaaaagggcgctttt
tcgtacgacattagcgccaatgcctccttcattcacaacaaagtcctgtcgctcagcgaa
ggtcggcccattcccggcgggcggatcgacaacggcgtcttcggtacactgaccgagccg
ggttatcccattggctcgttctacctgcttcagcaggacggaatttttcagaacgaaggc
cagatttttaccagtgcctttcagggtaataacatcaaacccggcgacgtccgcttcaaa
gacatgaacggcgatgggctcattaaccagttggatcggtcgcacgtggggagcccgatt
cccacgctgacctacggcctgacggccaacctgcaatggaaaaacttcgacctgtcggcc
ttctttcagggtgtttcgggcaacaagatctattaccaggttgccacggatattgaagga
ttttaccgggcgttcaacgtaacccaacgggtggtcgacgaccattggcatggcgaagga
accagcaatacacaacctcgggtatcgtggagtggatcggccaataacaagcaaccatcg
acccgttttctggaagatggggcttacacccgcctgaaaaatctccagctcggctacacg
ctgcccagcaccctcaccaaaaaactgggttcctccaccatccgggtgtatgtgagtggg
caaaacctgctcacgttcaccaagtaccccggcctggaccccgaacagcaaagcagcgac
aacgtgaacaacgagcagttcaagggcgatgtggccgtgggcatcgactggggcacgtat
ccaagcgccaaaacctatacggttggattaaatgtaagcttttag
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