Spirosoma sp. KCTC 42546: EXU85_26380
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Entry
EXU85_26380 CDS
T06164
Name
(GenBank) HAMP domain-containing protein
KO
K11383
two-component system, NtrC family, sensor histidine kinase KinB [EC:
2.7.13.3
]
Organism
spik
Spirosoma sp. KCTC 42546
Pathway
spik02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
spik00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EXU85_26380
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
spik01001
]
EXU85_26380
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
spik02022
]
EXU85_26380
Enzymes [BR:
spik01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
EXU85_26380
Protein kinases [BR:
spik01001
]
Histidine kinases
NtrC family
EXU85_26380
Two-component system [BR:
spik02022
]
NtrC family
KinB-AlgB (alginate production)
EXU85_26380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
HisKA
HAMP
PAS
PAS_8
HATPase_c_2
PAS_9
PAS_4
4HB_MCP_1
PMC2NT
Motif
Other DBs
NCBI-ProteinID:
QDK81945
UniProt:
A0A515A551
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Position
6401145..6402926
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AA seq
593 aa
AA seq
DB search
MTLRTKISLSLVFLFSIILMLGGLGAFYLNQLAEDSRAILKDNYISLEFVSTMQKALTTL
DDPDALADFESSLKKQEANLTEVGESQATRAVRREFTRLRAGATDLATINRIRMHLFAID
DVNRQAIVRKSKTAEQTAKDALLWLGSIGTFCFLIVFSFVINIPSYIAGPLRELTRGIKQ
IASRNFEERLHFSSSDEFGELARSFNSMAQKLDEYEHSNLARVLFEKKRIDTLVEIMSEG
IIGLDEKRRILFINPVAERLLGVERNRLIGQYAPDIATSNDLLRALIQDIMPDSAALHAQ
PASDLLRSETGGDLLKIYDPGLNGKGKESYFTKEIHAVEVTPTGETQTVQAGYVIMLLNI
TSYKELDLAKTNFIATVSHELKTPISAIKMSLKLLADKRLGTLNSEQQEMVNHVEENTDR
LLRLTGELLNMAQVESGQIQLQIQATNPAELVRVATSALRTQAEQKQIRFALNLPADLPA
VKADSDKASWVLINFLSNAIRHSPEQASIDITARQLGDQIEFTVRDYGPGLRDEHRDRVF
ERYFKAPGLNGPFSGTGLGLAISKEFIQSMGGQIGLHAEVSPGAAFYFRLAIA
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgacgctcagaaccaaaatatcactctcactggtctttctctttagcattattctgatg
ctgggcggattaggagcgttttacctgaatcagttggcagaagactccagggcaattttg
aaggataattacatctcgctggagttcgtcagcactatgcagaaagccttaactacgctc
gacgaccccgatgcgctggctgattttgagtcaagcttaaaaaaacaggaagccaatctc
acagaggtcggcgaatctcaggccaccagagcagtgcgccgggagttcactcggctacgg
gcgggcgctaccgatctggccaccatcaaccgtatccgaatgcatctgtttgccatcgat
gatgtaaaccgacaggccattgtccgaaaaagtaaaacagccgaacaaacggcaaaggat
gcgttgctctggctgggcagtatcggtacgttctgttttctgattgttttttcgttcgtc
attaacattcccagttacattgcgggtccgcttcgggagttaacgcgcggtatcaaacag
attgccagccgcaattttgaagagcgattgcattttagctccagtgacgaatttggggaa
ctggctcgctccttcaactctatggcccagaagctggatgaatacgaacactccaatctg
gccagggtgctgtttgagaagaagcggatcgatacgctggtggagatcatgagtgaaggt
atcatcggtctggatgagaaacgtcggatcctgtttatcaatccggtagccgagcgcttg
ctgggcgtagaacgaaatcgactcatcggccaatacgcccccgacatagctacctccaac
gatttgttacgggcgcttattcaggacattatgcccgactcggctgcacttcacgcccag
cctgcatccgacctgctacggtctgaaacagggggcgatctgctaaaaatctatgatccc
ggcctgaatggcaaagggaaggaaagttattttacgaaggagattcacgcggtagaggta
acccccaccggcgaaacccagacggtgcaggcgggttacgtgattatgctgctcaacatt
acctcctacaaagaactggatctggccaaaacgaattttatcgccacggtttcccatgaa
ttaaaaacgcctatttcggccatcaaaatgagcctgaaactcctggccgacaaacgatta
ggcaccctgaacagcgagcaacaggaaatggtgaaccacgtggaggaaaacaccgaccgg
ctattacgattaaccggcgagttgctgaatatggcccaggtggaatcaggacaaattcag
ctccagattcaggctaccaacccggccgaactggtacgggtagccaccagcgcactccga
acgcaggccgagcagaaacagatcaggtttgccctgaacctgcccgccgatttacccgcc
gtgaaagccgactccgacaaagcttcctgggtcctgatcaatttcctgtcgaatgcaata
cggcatagccctgaacaggcatctatcgatattacggctcgtcaactgggtgatcagatt
gaatttaccgtgcgtgactacggccccggactccgggacgaacaccgcgaccgcgttttt
gagcgctattttaaagcgccggggctgaatggcccctttagtggaacgggtcttggacta
gccatttccaaagagtttattcagtcgatgggtgggcagattgggttgcacgcagaggta
tctccaggggccgcattctatttccggctggccattgcctga
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