Spirosoma sp. KCTC 42546: EXU85_28300
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Entry
EXU85_28300 CDS
T06164
Name
(GenBank) endonuclease MutS2
KO
K07456
DNA mismatch repair protein MutS2
Organism
spik
Spirosoma sp. KCTC 42546
Pathway
spik03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
spik00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
EXU85_28300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spik03400
]
EXU85_28300
DNA repair and recombination proteins [BR:
spik03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
EXU85_28300
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Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
MutS_III
wHTH-PRTase_assc
CEP135_N
SIMPL
Trypan_PARP
Motif
Other DBs
NCBI-ProteinID:
QDK82300
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Position
6927516..6929963
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AA seq
815 aa
AA seq
DB search
MLYPNTLEQKLGFDTIRERLKEACVSPLGQDYVEKIRFTDNVQLIDKLLQQTTEFKQIVQ
YEPDFPNSNYIDVRPHLSRVRVEGLALTEAEFFDLKLALRTVQDCLRFLSRQSDSKRDES
TNFPFLRELAGPVGVDKKLTEALERVIDDRGNVRDSASPELASIRRRIIGEQANLRKRLD
SIIRQARQNGWIPDDLSLTVRGGRLVIPIAAEHKRKIKGFVHDESQTGQTVFLEPAEVFD
ANNEIRELEYAERREIYRILLALTDQVRPHLDDLRKAINFLAQIDFIRAKAKLAVQLDAI
MPKLHDRPFVNWINARHPLLYLSFSKQGKAVVPLNVRLDEKARILIISGPNAGGKSVALK
TIGLLQYMLQCGLLIPMAEYAEMGVFQNLFIDIGDEQSLENDLSTYSSHLTAMKQFLIGA
NKRTLFLIDEFGTGTEPGLGGAIAESILEDLNKSGAYGVINTHYTNLKVMADKTSGLING
AMRFDGEHLEPLYQLEIGRPGSSFAFEIAQKIGLPKGVIDRAKEKLGNQQVNFEKLLKEL
DIEKRVFSEKNIEIGINQRKLAQQLAEYTALKNRLDNDQKKIVNDAKQKAKALVQEANQR
IETTIREIKENKAEREPTKQIRQELERFEQKELKPEPVVVETPKQPEEEFENDGGAITVG
SYVRIAGQNTESTAAIGEVLTLRGKDAEIRIGDLKSNVKLNRLEKVSKKTFKEATDVRDD
RPRSQGVDINEKMQNFSFNLDIRGKRGEEALGEVDRFFDDALMLGYPELRIVHGKGDGIL
RTLVRNHLRGYKQVGKMEDEHADRGGAGVTIVKMR
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgctttacccaaataccttagaacaaaaattaggtttcgataccatccgcgaacgtctt
aaagaagcctgcgtcagtccgctgggacaggattatgttgagaagattcggtttacggat
aatgtacagcttatcgacaaactacttcagcaaacaacggagttcaaacagattgttcag
tatgaacccgacttcccgaatagcaattacatcgacgttcgaccacatctgagccgtgtc
cgtgtagaagggctggcgctaactgaagccgaatttttcgaccttaaactagcccttaga
accgttcaggactgtttgcgttttttatcccgccaaagtgactccaaacgggatgaaagt
acgaatttcccattccttcgcgaattagcgggtccagttggcgtcgataaaaagctgacg
gaagcccttgagcgcgtcattgatgatcggggaaatgtccgggattctgcttcgcccgaa
ttagccagcattcgtcggcgtattatcggcgagcaggctaatctgcgcaaacggctcgat
agtatcattcggcaggcccggcaaaatggctggattcccgacgatctctcgctaaccgtt
cgcggaggacggctggtaatacccattgccgccgagcacaaacgcaagatcaaaggcttc
gttcatgacgagtcgcaaacggggcaaacagtgtttctcgaacccgctgaagtcttcgat
gccaacaacgaaattcgggaactggagtatgcagaacgacgcgaaatctatcgtattctg
ctcgcccttactgaccaggttcgcccccatttagacgacttaagaaaggcgatcaatttt
ctggcgcaaatcgacttcattcgggcaaaggccaaattggctgttcaattggatgcgatc
atgcctaagctccacgaccgaccttttgttaattggatcaatgcccggcatccattgctt
tatctctcattttcgaagcaggggaaagcggttgtacccctcaatgttcggttagatgag
aaagcgcgcattctgattatttcagggccgaatgcagggggtaaatccgttgcccttaaa
acaattggcttgttgcagtacatgctgcaatgcgggttacttataccgatggctgagtac
gcagaaatgggcgtttttcagaatttgttcatcgacattggcgacgaacagtcacttgaa
aatgacctcagtacgtattcgtcgcacttaaccgccatgaaacagtttctgattggcgct
aacaaacggacgctgtttctgatcgacgaatttggtacaggaacagagcctggtttaggg
ggagccattgccgaatccattctggaagatctcaacaagtccggcgcttatggtgtgatc
aatacacactatactaacctaaaggttatggccgacaaaacgtcggggctgattaatggc
gccatgcgcttcgatggcgagcatctggaaccgctgtatcagttagaaattggtcggccg
ggctcttcgtttgcgtttgagattgctcagaaaattgggctgccgaaaggcgtcattgat
cgggcgaaagaaaagctcggtaatcagcaggtgaatttcgagaaattgctgaaagaactt
gatatcgagaaacgggttttctccgagaaaaacatcgaaatcggcatcaatcaacggaag
ctggcgcagcagttggccgaatataccgccctgaaaaatcgcttagacaacgatcagaag
aagattgttaacgacgccaaacaaaaggcgaaagccctcgttcaggaagcaaatcagcgg
attgaaactactatccgtgagattaaggaaaataaagccgagcgcgaacccacgaagcag
atccgacaggagttggaacggttcgaacaaaaagaactgaagccagaacccgttgttgtc
gaaacgcccaaacaacctgaggaggagtttgaaaacgatggtggagctattaccgttggc
agctatgttcgcatagcaggccagaacaccgaatccacggcggccattggcgaggtactg
actctgcgtggtaaagatgccgaaatccgtatcggggatctgaaatcgaatgtcaaacta
aaccgacttgaaaaagtaagcaagaagaccttcaaagaggctactgacgttcgggacgac
cggccccgcagccagggtgttgatataaacgaaaagatgcagaactttagcttcaaccta
gacattcggggcaaacggggtgaagaagccctcggcgaagttgatcgtttttttgatgat
gcgttgatgctcggctacccagaactccgcatcgttcatggtaaaggcgacggtattcta
cgcaccctcgttcggaaccaccttcgagggtataaacaggtgggaaaaatggaagacgaa
cacgctgatcgaggtggcgcgggtgtgacaattgtaaagatgagataa
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