Spirosoma sp. KCTC 42546: EXU85_28515
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Entry
EXU85_28515 CDS
T06164
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
spik
Spirosoma sp. KCTC 42546
Pathway
spik00300
Lysine biosynthesis
spik00470
D-Amino acid metabolism
spik01100
Metabolic pathways
spik01110
Biosynthesis of secondary metabolites
spik01120
Microbial metabolism in diverse environments
spik01230
Biosynthesis of amino acids
Module
spik_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
spik00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
EXU85_28515 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
EXU85_28515 (lysA)
Enzymes [BR:
spik01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
EXU85_28515 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
QDK82339
UniProt:
A0A515A659
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Position
complement(6991759..6993018)
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AA seq
419 aa
AA seq
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MQLNNQTYQIQGVDVLDIADEFGLPLYVYDADKIIEKIGLLRSSFAGVNLKIKYAAKALT
NVSILKLMRQQGVEMDSVSVNEARMGMLAGFAPGQIMFTPSGVSFGEIREAIDMGLQLNV
DSLPLLEWVGQNYGSQVPVSIRINPHISEGGNIKISTGHADSKFGISILQRVDMLSIVEQ
YGISVVGLHIHTGSDFKNANAFLKGADVLFDLASDYPNLTFIDFGSGFKVAYKEGDHITD
VPELGRQVSAAFQNFCQQYGRNLELWFEPGKFLVSESGHLLVKTNIVKENPTRTFVAVDS
GLNHLIRPMMYDSYHDIKNISNPTGSTKTYNVVGYICETDTFATDRPLPEVRPGDVLSFE
NAGAYGFSMSSNYNARFRPAEVLVYEGKPYVIRQRETFEDLMRGQVDLSIFNQQEILNV
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgcaactaaataaccaaacctaccagattcagggcgttgatgtactggacatagccgac
gagttcgggttgccattgtatgtatatgatgccgacaaaattatcgaaaaaataggcttg
ctccggtcttcattcgccggggtcaacctgaagataaaatacgcagcgaaggcattgact
aatgtgtcgattttgaaattgatgcggcagcagggtgtagaaatggattcggtttcggtc
aacgaagcgcggatgggtatgctggctggttttgcgcccggtcagattatgtttacgccc
agcggagtttcgtttggcgaaatccgcgaagctatcgacatggggctacagttaaatgta
gatagtttgccgttgctggagtgggttggacaaaactacggaagccaggtgcccgttagc
attcgtatcaatccacacatcagcgaaggcggcaatatcaaaatttcgacgggtcatgcc
gattccaaattcggtatttcgattctgcaacgggtcgatatgctgtccatcgtggaacag
tacggaatttcggtggtgggattgcatattcatacgggttcagatttcaaaaatgccaat
gcctttctgaaaggagccgacgtgttgttcgatctggccagcgattaccctaacctgacg
tttattgactttggcagtgggttcaaggtggcatataaagagggtgaccacattacagat
gttcccgaattgggccgtcaggtgtcggctgctttccagaatttctgccaacaatacggg
cgtaacctggaattgtggttcgaacccggcaaatttttggtcagcgagagcgggcatttg
ctggttaaaaccaacatcgtcaaagaaaacccaacacggacattcgtagcggtagattcg
gggctgaaccaccttattcgacccatgatgtacgattcgtatcacgacatcaaaaacatc
tcgaatccaacaggctcgacgaaaacctacaacgtggtgggctatatctgcgagacagat
acgtttgccacagatcgccccttgcctgaagttcggccgggagatgtgctgtcgtttgag
aatgccggagcctatggtttcagcatgtcatcgaattataacgcccgctttcgccctgcc
gaagtactggtttacgaaggcaagccctacgtaattcgccagcgcgagacctttgaggac
ttgatgcgagggcaggtagatttatcaatttttaatcaacaggagatactaaatgtataa
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