Spirosoma sp. KCTC 42546: EXU85_28575
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Entry
EXU85_28575 CDS
T06164
Name
(GenBank) RNAse Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
spik
Spirosoma sp. KCTC 42546
Brite
KEGG Orthology (KO) [BR:
spik00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spik03016
]
EXU85_28575
Enzymes [BR:
spik01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
EXU85_28575
Transfer RNA biogenesis [BR:
spik03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
EXU85_28575
Prokaryotic type
EXU85_28575
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
HNH_repeat
Motif
Other DBs
NCBI-ProteinID:
QDK82351
LinkDB
All DBs
Position
7003195..7004073
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AA seq
292 aa
AA seq
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MILTITGYSTALFSTWYFVEELRLLLDAGDGIAPTLLQKSRKIDHIFLSHADRDHVTGLL
RLNELNAREGFPSVYYPTDAVSISALETFSKQFDGRVKKTVWHPMGDQQHIQLRKDLFVQ
SARNNHVLNAQPHEVKSLGYQIYHTKNKLKSDFVDLSGEALRQLAEKFGRETLTDEVRTN
LLAYSGDTPAENFDQWNNTQILIHEATFLTRAEFSTLETNRNQHSTLEDVLAAVADLNIK
TLILGHFSSRYSAEKIDEAIRRFCTAFHVTIPVHRLLPGQTHWDILRSDPIN
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgatactgacgataactggttattcgactgctctattttcaacttggtatttcgttgaa
gagctacgactattactcgacgcgggcgatggcattgcccccacactcttacagaaatct
cgcaagattgaccatattttcctgtcccacgctgaccgcgaccacgtaacaggactgtta
cgcttgaatgaactaaacgcccgcgagggctttccatccgtttattatccaaccgatgcg
gtgtctatttcagccctagaaaccttttcaaaacaatttgatgggcgagtcaaaaaaacg
gtatggcacccgatgggtgatcagcaacacattcagcttcgtaaagacttatttgtgcaa
tcggcccggaacaatcacgtactcaacgcacaaccacatgaagtaaaaagcttgggctat
cagatttaccacacaaaaaataagcttaaatcagatttcgtcgacctgtcaggggaagcg
ttgcggcagttagcggagaagtttgggcgggaaactcttacggatgaagtcaggacaaac
ttactagcgtattcaggcgacacacccgccgaaaactttgatcagtggaataacacgcag
atcttgatccacgaagcgaccttcctgacccgtgccgaattttctacattagaaacgaac
cggaatcaacacagcacgctggaagatgttttggcggctgttgctgatcttaacattaaa
acgctgattctgggtcatttctcgtcgcggtattctgcggaaaaaatagacgaggccatt
cgtcgtttctgcaccgcctttcacgtaaccattccggttcatcggcttctaccgggtcaa
acgcattgggatattttacgaagcgatccgattaactaa
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