Spirosoma sp. KCTC 42546: EXU85_30535
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Entry
EXU85_30535 CDS
T06164
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
spik
Spirosoma sp. KCTC 42546
Pathway
spik03030
DNA replication
spik03430
Mismatch repair
spik03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spik00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EXU85_30535
03430 Mismatch repair
EXU85_30535
03440 Homologous recombination
EXU85_30535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spik03032
]
EXU85_30535
03400 DNA repair and recombination proteins [BR:
spik03400
]
EXU85_30535
Enzymes [BR:
spik01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EXU85_30535
DNA replication proteins [BR:
spik03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EXU85_30535
DNA repair and recombination proteins [BR:
spik03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EXU85_30535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNAX_ATPase_lid
RuvB_N
AAA_22
DNA_pol3_gamma3
RCF1-5-like_lid
AAA_5
AAA_14
Rad17
AAA_30
AAA_16
AAA_18
NTPase_1
AAA_2
Mg_chelatase
AAA_19
DNA_pol3_delta_C
AAA_24
AAA_7
RNA_helicase
AAA_33
AAA_assoc_2
nSTAND3
SKI
VapE-like_dom
Sigma54_activ_2
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QDK82712
UniProt:
A0A515A781
LinkDB
All DBs
Position
7502406..7504331
Genome browser
AA seq
641 aa
AA seq
DB search
MENFVVSARKYRPATFDTVVGQEHITTTLKNAIKTNHLASAFLFCGPRGVGKTTCARILA
KTINCQNLTADGEACDQCESCVSFNQSASFNIHELDAASNNSVEDIRNLIDQVRYPPQSG
KYKIYIIDEVHMLSSAAFNAFLKTLEEPPSYAIFILATTEKHKILPTILSRCQIFDFNRI
QPGHIANHLAQIAEKEGVTAETEALDLIAQKADGGLRDALSMFDLNVTFAADRIIRYKEV
LDNLHILDYDYYFKLTDLLLAGNLPQSLLTVDEILRKGFDGHQFIVGLCRHFRDLLVCKD
AATVQLLQVTENVRRQYLDQAARAPMSFLLSALSLGGQCDMNYKQAKDQRLHTELWLMKL
ANLRNLLNWEALPDLPLNGIHSGETTTVSQVMAEKKNAGPTIGNPKPSPDSSQLIESHPI
TSEPVNGYHSTVPANGNGTVMNGLAKPNEQTAATNAQVTAVVTPQPAVAKSDLPPRPQPV
PPTRPAGSRLRSTVALTTGPVQPEAATDAAPIVVASTRPDKPFDFDELQAAWQAFAKLRR
EKSDITTEQVVLNRDLILDGTTIHLKLDNTLQVDFLTELKPDLLGYLRTELQNSQIKLEH
QVVVQEVKKMIYSSQDKYNYLAEKNPALHELRKVLNLEVDY
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatttcgtggtctcggcccgcaagtaccgtcccgctaccttcgacactgtcgtg
ggtcaggaacacattactaccacacttaaaaacgcaatcaagaccaatcacttagcgtct
gccttcctgttttgcggaccacgcggggttggtaaaacaacctgtgcccggattctggcc
aagacaatcaattgtcaaaacctgactgccgatggagaagcctgcgaccaatgtgagtcg
tgtgtgagctttaatcagagtgcatcgtttaatattcatgagctggatgcggcttcgaac
aactccgttgaagatatccgcaacctgattgatcaggttcgttatccaccccaatcggga
aaatacaagatctatattattgacgaggtgcacatgctctcgtcggctgcgttcaatgcg
ttcctgaaaacgctggaagaacccccctcctatgccatctttattctggccacaacggag
aagcataaaattctaccaacaattttatcgcgttgccagattttcgactttaatcggatt
cagccggggcacattgccaatcacctcgcccaaattgctgaaaaggaaggtgttactgcc
gaaacggaagccctggacctgattgctcagaaagctgacggggggttgcgtgatgcgttg
tcgatgttcgatttgaacgtgacctttgcggccgaccggataatccggtataaggaagtg
ctggataacctccacattctggactatgattattatttcaaactgacggatttactgttg
gcaggtaatcttccccaaagcttgctgacagtcgatgagattctgcgtaagggtttcgac
ggacatcagtttatcgttggcttgtgtcgtcacttccgggatttgctggtttgtaaagat
gcggctacggttcagttgctgcaagtgaccgaaaacgttcggcggcaatacctcgaccag
gcggctcgggcgcccatgtcgtttttactctcagcccttagccttggcggtcagtgcgac
atgaactacaagcaggctaaagaccagcggctacacaccgaattgtggctgatgaaactg
gccaatttgcgtaacctgctcaactgggaagccctcccagacctgccactcaacggtata
catagtggagaaacgacgacagtaagccaggtgatggctgaaaaaaaaaacgctggaccg
acaatcggcaatcccaagccctcgcctgatagcagccaactaatcgaaagtcatcctatc
acaagtgagcctgtgaatggataccattccaccgtacctgctaacggtaacggcacagta
atgaatggattggctaaacccaacgagcaaacagcggcaacaaatgcgcaggtaacagcc
gtagtcacaccacaacctgctgttgccaagtcggatttaccgcccaggccacaaccagtc
ccaccaacaaggcccgccggaagtcgattacggtcgacagttgccttaacaacggggccg
gttcaacccgaggctgctaccgatgcagcacccattgttgtagcatcgactcgccctgat
aaaccgtttgatttcgatgagttacaggccgcctggcaagcctttgcaaaacttcggcgt
gagaaaagcgatattaccaccgaacaggttgtcttgaatcgcgatctgattctggacggc
acaacgattcatcttaagcttgacaacaccctgcaagtcgattttctaaccgaactgaag
cccgacctgctgggctaccttcgcactgaacttcagaatagtcagattaagcttgagcat
caggtagttgtgcaggaagtgaagaaaatgatttacagctcgcaggataaatacaactac
ctggccgagaaaaaccccgccctgcatgagttacgaaaggtgttgaatctggaagtagat
tattga
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