Spirosoma sp. KCTC 42546: EXU85_31465
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Entry
EXU85_31465 CDS
T06164
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
spik
Spirosoma sp. KCTC 42546
Brite
KEGG Orthology (KO) [BR:
spik00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spik03019
]
EXU85_31465
03009 Ribosome biogenesis [BR:
spik03009
]
EXU85_31465
Messenger RNA biogenesis [BR:
spik03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EXU85_31465
Ribosome biogenesis [BR:
spik03009
]
Prokaryotic type
rRNA processing factors
EXU85_31465
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
ATG17_like
S1
DnaJ_CXXCXGXG
DUF7351
Motif
Other DBs
NCBI-ProteinID:
QDK83917
LinkDB
All DBs
Position
7747788..7749296
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AA seq
502 aa
AA seq
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MQNKRLLEYHEEELDSSFTVGDLYLGTVKKLSSGLNAAFVDVGHEKDGFLHYQDLGPNIN
SLNKLVKDVIAKRVTSGRLSGMKLEPPIDKIGKIDKVLTKNAPILVQVVKEPISTKGPRL
SCDISIAGRYLVLVPFSDGVNLSKKITDRAERSRLMRLMSSLKPQNFGVIVRTVAQDKDV
EELDRDLQNSLAKWDQALKSLADAKPRDRVLGEMNRASSILRDMLNESFESITVDTRESY
DEIRDYIHTIAPDKEKIVKLYSGKVKVFEALGLEKQLKSLFGRSVSLPGGGYLIIEHTEA
LHVIDVNSGNKSNSEEDQEATAISVNREAAKEIARQLRLRDMGGIIVVDFIDMKKAENKK
LLQDIMRDEMKPERSKFTILPLTKFGLMQITRQRVRPEMNIVTREVCPTCGGTGTIQASV
LVTDVIENNLDYILTKQNERGISISMNPFLYAYYTKGIYSKQMQWYMKYKTWVKVIKDSS
LGMVNFKFFHKSGEEIEVSNNA
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaaacaagagattgctggagtatcacgaagaagagttagacagcagcttcaccgtt
ggcgatctttacttaggaacagtcaagaaattatcatcgggcctaaacgctgcttttgta
gatgttggccacgagaaagacggttttttgcactaccaggatttaggaccgaatattaat
tcgctcaataaactggttaaagacgtaatcgccaagcgcgtcaccagcggacggctcagc
ggtatgaagttagagccacctatcgacaaaatcgggaaaatcgataaggtgttgacgaag
aacgctcccattctggttcaggtggttaaagaacccatctcaaccaaaggtccacgcctt
tcctgtgatatctctattgcaggccgttatttagttttagtgccattttcagatggcgta
aacctttctaaaaaaattactgaccgtgccgagcggtcgcggttgatgcgcttaatgtca
tcactaaaaccgcaaaatttcggtgttattgtacgaactgttgcgcaggataaagacgtt
gaagaactcgaccgcgacctgcaaaactcacttgccaaatgggatcaggcacttaagtcg
ctggccgatgccaaaccccgtgaccgcgtactgggtgaaatgaatcgggcttcgtccatt
ttgcgtgatatgctcaacgagtcgtttgagagtataacggtagacacccgtgaatcctac
gacgaaatcagggattatattcacaccattgcaccagacaaagagaagattgttaaactc
tacagcggtaaagtaaaggtttttgaagcactggggcttgaaaaacaacttaaatccttg
tttggtcggtcagtaagcttacccggtgggggctatctgattattgagcatacagaagca
ttgcacgtcattgatgtaaacagtggtaataagtcgaattctgaagaagatcaggaagca
actgccattagtgtcaatcgtgaagctgctaaagaaattgcccgtcaacttcgactccgc
gacatgggtggtatcattgtcgtggatttcattgacatgaaaaaagcggagaataaaaaa
ctcctgcaagatatcatgcgcgatgaaatgaaaccagagcgctcgaagtttacgattcta
ccccttacgaaatttggcctgatgcagattacacgtcagcgggtccggccggaaatgaac
attgttacgcgtgaggtttgccccacttgtggaggcactggcacgattcaggccagtgtt
ttagtaacggatgttattgaaaataacctcgattatatcctgacgaaacagaatgagcgc
ggtatttcgatttcaatgaatccatttttatatgcgtattatactaagggtatttactca
aaacaaatgcaatggtatatgaaatataaaacatgggttaaagtaattaaagatagctct
ctaggtatggtcaactttaaattctttcataagtcaggcgaagaaattgaggttagtaat
aatgcctag
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