Spirosoma sp. KCTC 42546: EXU85_31685
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Entry
EXU85_31685 CDS
T06164
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
spik
Spirosoma sp. KCTC 42546
Pathway
spik03030
DNA replication
spik03430
Mismatch repair
spik03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spik00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EXU85_31685
03430 Mismatch repair
EXU85_31685
03440 Homologous recombination
EXU85_31685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spik03032
]
EXU85_31685
03400 DNA repair and recombination proteins [BR:
spik03400
]
EXU85_31685
Enzymes [BR:
spik01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EXU85_31685
DNA replication proteins [BR:
spik03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EXU85_31685
DNA repair and recombination proteins [BR:
spik03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EXU85_31685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QDK82923
LinkDB
All DBs
Position
complement(7803984..7804805)
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AA seq
273 aa
AA seq
DB search
MTHQLILRKPLAFFDLETTGINIAKDRIIDICIMKALPGGEVVSKTQRVHPGMPIPLESS
LIHGIYDDDVKDAPPFKSVARTLAQFLDGCDLAGFNCNRFDVPLLVEEFLRANVDFDMKN
RRLVDSQRIFHLMEPRNLSAAYRFYCNKELIGAHGAEADTIATLEVLDAQVQRYMGMVAK
ADNGQDVIFENDVDMLHSLTANTNVDLAGRIILNDKGEEVFNFGKHKGFPVLEVLKKEPS
FYDWILKGEFPLDTKRRLTEIRLRMFSNGIGKK
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgacgcatcaacttatacttagaaaaccgctcgcgtttttcgatctcgaaacaaccggt
atcaacattgccaaggatcgcatcattgatatctgtatcatgaaagcgcttcccggtggt
gaagttgtcagtaaaacccagcgtgtacatccgggtatgcccataccattggagtcgagc
ctgattcatggtatttacgacgacgatgtaaaagacgcacccccatttaaatcggttgcc
cgaacgctggcccagtttctggatgggtgcgatctggcaggctttaactgcaatcgcttc
gatgtcccgttgcttgtcgaagagtttctgcgtgctaacgtagacttcgatatgaaaaat
cggcggttggtggattcgcagcgcatttttcatctgatggaaccccgaaatctttcggcg
gcttaccgattctattgcaacaaagaattaatcggtgctcacggtgccgaagcagataca
atagccaccctcgaagtgctcgatgcgcaggtacaacgctacatgggcatggttgccaaa
gcggataatgggcaggatgtcatcttcgaaaatgatgtggatatgcttcatagtctgacg
gcaaacacgaatgttgacctcgccgggcggataattctcaacgacaaaggcgaagaggta
ttcaatttcgggaaacacaaaggttttcctgtgttggaggtacttaagaaggaaccttct
ttctacgactggatattgaaaggcgaattcccgctggatactaaacgccgattgaccgaa
atcaggctgcggatgtttagtaatggcatcgggaaaaagtaa
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