Spirosoma sp. KCTC 42546: EXU85_35025
Help
Entry
EXU85_35025 CDS
T06164
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
spik
Spirosoma sp. KCTC 42546
Pathway
spik03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spik00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EXU85_35025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spik03019
]
EXU85_35025
03400 DNA repair and recombination proteins [BR:
spik03400
]
EXU85_35025
Enzymes [BR:
spik01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EXU85_35025
Messenger RNA biogenesis [BR:
spik03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EXU85_35025
DNA repair and recombination proteins [BR:
spik03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EXU85_35025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Cas3-like_C_2
HemN_C
DnaD_N
T4SS-DNA_transf
Motif
Other DBs
NCBI-ProteinID:
QDK83538
UniProt:
A0A515A9M9
LinkDB
All DBs
Position
complement(8608958..8610871)
Genome browser
AA seq
637 aa
AA seq
DB search
MTVRQLLQQFWGYTNFRPMQEDVVNAVLARQDTLVLMPTGGGKSVCFQVPTLAMKGVCIV
VTPLIALMKDQVEQLRKRGIPAAAIYSGMNSREIDTTLDNCIYGNTKFLYVSPERLRTEI
VIERVKQMTVCLLAIDEAHCISSWGYDFRPPYLQIAEFRELIPDTPIIALTASATPDVQA
DILDKLKLKEPAVFRQTFARPNLSYSAVLEENKEARLLKILQNVPGCAVVYVRSRRQTQK
VAQWLLKQGISADFYHAGLTTQQRSEKQDAWIQDQTRVMVSTNAFGMGIDKPDVRVVVHL
DVPDSLEAYYQEAGRAGRDGLKAYAVMLYTPGDLESLRFRTEQLYQPIEMLRRVYQALAN
YTAVPVGGGEFSSYDFDLGAFAATFSLPPQETHYALKQLQLEGFIQLNENYFHPSRLTIT
LDNRQLYEFQVLNPRFDSFLKLLLRVYGGELFTDFITISESNLARTFLINQSEIEQLLTQ
LHQRNVVIYEKQKDKPQLTFLTPRFDAPSLPVNMQELNRRKELAMRKVQAAILYTEHVTQ
CRTRLLQAYFGEKPGDACGICDNCIKKKKSAETVTTVVRDQVREYVALANGPGVSPKQLA
HHFAQTDADSLAQIVKQMLAEEEIRYNKNGNLTLNLG
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgtccggcaactattacagcagttttggggatacaccaacttccggcctatgcag
gaagatgttgtcaatgcggtactagcgcggcaggataccctcgtactgatgcctacgggc
ggaggcaagtccgtttgctttcaggtccccaccctggccatgaaaggagtgtgcattgtg
gtaacgcccctcattgcgctgatgaaagaccaggtcgagcaacttcgtaaacgaggtatt
ccagcagcggccatttattcgggaatgaactcccgtgagattgataccacgctcgataac
tgtatttacggcaacaccaaattcctgtacgtttcaccggagcgactacggactgaaatc
gttattgagcgtgtcaaacagatgacggtttgcctgctggcgattgatgaagcccactgc
atttcgtcctggggatacgatttccgaccgccttatctgcaaattgctgaattcagggag
ctcattcccgatacaccgattattgcgcttacggcttcggcaacacccgatgttcaggcc
gatattctggacaaattaaagctaaaagagcctgccgttttccggcaaacctttgcccgc
cccaacctgtcgtattctgctgtgctggaagaaaacaaagaagcacgactcttaaagatt
ttgcagaatgtaccgggttgcgccgttgtttatgttcgtagccgtaggcaaacgcaaaaa
gtggcgcagtggctcctaaagcagggaatttcggcagatttttaccacgccggattaacc
actcagcaacggtccgaaaaacaggatgcctggattcaggatcagacccgcgtcatggta
tccaccaatgcatttggtatgggcatcgacaaacccgatgtacgtgtagtggtccatcta
gacgttcccgattcactcgaagcgtattatcaggaagcgggcagggcaggccgcgatggt
ttgaaggcctatgcggtgatgctttacacacccggcgatctggaaagtctgcgtttccga
accgagcagctttatcaacccattgagatgctacgccgggtgtatcaggcgctggccaat
tatacggctgtacccgttggcgggggtgagtttagcagttacgacttcgatctaggcgcg
tttgcagctacatttagcctgcctccacaggaaactcattacgcgcttaaacagcttcaa
ctagagggatttatccagttaaacgaaaactatttccatccctcacggctaactattaca
ctggataacaggcaattgtatgaatttcaggtactgaacccgcgtttcgactcgtttcta
aaattactattacgggtatatggtggtgagttgtttacggattttatcactatctccgaa
tccaatctggcgcgaacctttttgattaaccaaagcgaaattgagcaactattaacccag
ttgcatcagcgtaatgtggtcatttacgaaaagcagaaagacaagccgcaactcacgttt
ctgactccccgcttcgacgccccctcactgcccgtaaacatgcaggagctaaaccggaga
aaggagttggccatgcgaaaagtacaggcagctatcctgtataccgaacatgtcacccag
tgccgaacccggctactccaagcgtatttcggtgaaaaaccgggggatgcctgtggcatt
tgcgacaactgtatcaaaaagaagaaatcggcggaaacggtcacaaccgttgttcgggat
caggtgcgggagtatgtcgcactcgccaatgggccaggcgtatcgcctaaacaactagct
catcatttcgcccaaacggatgctgattcacttgcccaaattgtaaaacagatgctggcc
gaagaagaaatccggtataacaaaaacggcaatctgacattaaatttgggctaa
DBGET
integrated database retrieval system
