Spirosoma sp. KCTC 42546: EXU85_35040
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Entry
EXU85_35040 CDS
T06164
Name
(GenBank) peptidase S13
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
spik
Spirosoma sp. KCTC 42546
Pathway
spik00550
Peptidoglycan biosynthesis
spik01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
spik00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
EXU85_35040
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
spik01002
]
EXU85_35040
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
spik01011
]
EXU85_35040
Enzymes [BR:
spik01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
EXU85_35040
Peptidases and inhibitors [BR:
spik01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
EXU85_35040
Peptidoglycan biosynthesis and degradation proteins [BR:
spik01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
EXU85_35040
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
QDK83541
UniProt:
A0A515A9K9
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Position
8614312..8615592
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AA seq
426 aa
AA seq
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MKALFPLVFVCFVLGCSPARRITRDLHTNPIYTDHFTGVALYDPARQKSLIQYNADKPFT
PASNTKLFSFYTGLLSLHDSLPVLRYVTNGDSLIFWGTGNPLLLHPDLPDTTALSFLRKR
PERLFFSPVNYTGPRFGPGWAWDDYNDDYSPELAPFPLYGNVVRFQNGLQSIVTASPHRF
VDSIHVSADGKAINGVKRSEFSNQFTYSASSKSARQDVPFRWSAELAAQLLADTLHRTIG
IVNHPLTPNARLIRGSSTDSLYKRMLYVSDNQFAEQVLFMASAERGGSTLIPTTEIRRMV
DSVLHLPVGAARWVDGSGLSRYNVFTPNVLIDLLRLIYAKVPQQRLFALLPAAGQSGTLR
SLAMDGKPYIFAKSGSMTGVYNLSGYVLTKSGKVLYFSIMHNNFTQTVSEMRRRTGELLK
EIHERF
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcattgtttccgcttgtcttcgtctgttttgttcttggttgctcccctgcccga
cgcatcacccgagatctgcatacgaatccaatctataccgaccactttacgggtgtcgca
ctttatgatcctgcgcggcaaaagtctctgattcagtacaatgcggataagccttttaca
cccgcatcgaataccaaattgtttagtttctatacgggactgctgtcattgcatgactca
ctccccgtattgcgctatgttacgaatggcgattcactgattttctggggaaccggaaat
ccattattgcttcaccctgatctgccggatacaaccgcgctatcttttctgcgaaaacgc
ccggaacgactgtttttttcaccagttaattataccggtccccgcttcgggccgggttgg
gcctgggatgattacaacgatgattattctccagagttagcaccatttcccctatatggt
aacgtggttcgatttcaaaatgggctgcagtccatcgttacggcgagtccccaccgattt
gtggatagcattcatgtttctgccgatggcaaggcaattaacggtgttaaacggtctgag
tttagtaatcaatttacgtattcagccagtagcaaatcagcacgacaagatgtgccattt
cgatggtcggcagagttggcagcccagttactagccgacacgttgcaccgaactattggt
attgtaaaccatcccctaacaccgaatgcccgattgatacggggctcatcgacagactca
ctttacaaacgaatgctatatgtaagtgataatcaatttgccgaacaggtgttgtttatg
gcttcggcagagcgaggaggttcaaccctcataccaactacagagatacgccgaatggtg
gatagtgtattgcacctacccgtgggggcagcccggtgggtagatggttccggactatcg
cgttacaatgtgtttacgccgaacgtgctaattgatttactccgcctgatttatgctaaa
gtccctcagcaacgcctgtttgcgttgttgcccgcagccggacaatcgggaacattacgg
agcctggctatggatgggaaaccctacatttttgctaaatcaggctctatgaccggggta
tataacttaagtggctatgtattaaccaaatctgggaaggtgctatatttcagtattatg
cataataatttcacacagactgtcagtgaaatgcgtcgacgaacgggcgagttgttgaag
gagatccatgaacgattttaa
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