Sardina pilchardus (sardine): 134058303
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Entry
134058303 CDS
T10667
Symbol
abca7
Name
(RefSeq) phospholipid-transporting ATPase ABCA1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
spil Sardina pilchardus (sardine)
Pathway
spil02010
ABC transporters
spil04148
Efferocytosis
Brite
Transporters [BR:
spil02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
134058303 (abca7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane_3
ABC_tran
R1_ABCA1
AAA_21
AAA_23
Motif
Other DBs
NCBI-GeneID:
134058303
NCBI-ProteinID:
XP_062371542
LinkDB
All DBs
Position
15:complement(5979752..6009628)
Genome browser
AA seq
2400 aa
AA seq
DB search
MGICTQLLLLLWKNITYRRRNKVQLLIEILWPLFLFLILIAVRRSHPPYKQSQCHFPNKA
LPSAGTLAWVQGIVCNINNPCFHQPTPGEMPGQVGNFDNSILSRILVETRTALAYSSNQT
AFHGFQELLDVAQRLGERPEAWPNLPVGEYLRANETFSNFLVTNGSLPRPALDALLRARL
NFQVVSLSGAGMRLADIVCNASLLERFLTVEGGDSMTELQASLCAVDPDTLQQAEQLFLS
QLDYSKIFTRERLRANVGELRALSQAVTSVSQEVAGILDDLSGLSGFSDLNSELRLLSPE
NRTEAPLQSFRAFSRIVCGHPEGGVERIPSFNWYEDQDVKSFLGRNGTEEDDLDNDNVTT
PFCKSVIQNLESNPLSRIVWRGIKPLFIGKLLYTPDTPAVREVMKEVNKTFQDLQILQDL
KGAWEEIGPRVKTFMESSVEIRLLQDLLRRPEVAVLVNMRLENTSWTASRITRFLSTPSP
DTPRKEGAPPTWFDIFQDVNHTISTLGQITECFSLDKLEGAATEGQMIDRALELLEDRQF
WAGIVFLLPDPSAPTLPPHVSYKIRMDIDDVTRTNKIKDKFWDPGPAAEPFSDMRYIWGG
FVYVQDLVERGLTRVMTGKEQNTGVYLQQMPYPCFVDDVFLRVLNRSLPMFMTTAWMYSV
AMIIKCVVYEKEARLKETMRIMGLGSGTLWVSWFISSYVPFLVSAGLLVSLLQYGDILPY
SDPVVVFFFLAAFATATILLCFLISTLFSRANLASACGGLIYFSLYLPYVPCVAWRDHLT
TTHRVLLSFLSPVAFGFGCEYFSQYEEQGVGIQWFNINSSPLEGDTYSFVTSIVMLYVDA
FIYGVLAWYIEAVFPGEFGVPRPWYFIFQLNYWGGIPLEMGMPIPPAPRDEQNERVEPEP
QNLVLGVAIRDLVKIYKNGGKLAVNHLNLKFYEGQITSFLGHNGAGKTTTISILTGLFPP
TAGTMYVRGMDIRRDMEWIRRTLGVCPQHNVLFDILTVEEHVWFYGRLKGLNNTEVMEET
TSLLDDVGLLHKRHEETRNLSGGMKRKLSVAIAFIGGSKVVVLDEPTAGVDPYSRRAIWD
LLLKYRKDRTIILSTHYMDEAELLGDRIAIISQGKLCCCGTPLYLKSKLGTGYYLTVVKK
EVDSRTPSTSASAGKLSLPPVPKDSDSSLSDDTGLGSEENGPDVPALVALAQHHMPEARL
VQDLGREAILNLPHRSAEDGSLALFLSELEKRQADMGITSYGLSDTTLEEIFLKVAEETG
VDVDPAEPERPPSSPRQRRPDPPEEREPEPKETDLLSEEGRGGDPATGWWLTWQQLRALF
VKRWLYARRSRRGFIAQIVLPALFVLVALFFSLLAPPFGKYPALKLQPWMYGDQYTFYSN
DAPTDPEIQNLLDALLDPPGFGTKCMDAEMDPAVNTTCSQDPGSRFLRPQIPYSTWQLLG
KGNWTAALPSPECECSTEEVRRMLPDCPEGAGGLPPPQIKRLTGDVLQNLTGRNISDYLV
KTYPQILKKSMKTKRWVNEFRYGGFSLGGKASQPISEGHYLDEPVMAIRSRYRVPENSSF
DNLLHRLPGFLSGLNREQNVKVWFNNKGWHAMVSFVNVLNNGLLRANLPPGVDKRLYGIT
AYNHPLNLTKEQLSEMALMTTSVDVLVSICVIFAMSFVPASFVLFLIEERVSKAKHLQFV
SGVKPVLYWLANYTWDMLNYSVSATMVVLIFICFQQQSYVSETNLPALVLLLMFYGWSIT
PLMYPASFLFEVPSTAYVVLTSVNLFIGMNGSIATFVLELFVDQHLNDVNKILKKVFLIF
PHFCLGRGLIDMAKNQAMADAFQRLGAKKSLDPLEWDFVGKNLFAMAVEGVVFFIFTILL
QYGFFCKFRPWSDPVLPPLGPEDDDVAKERDRVRNGRAQGDLLSMKDLSKIYKAGRKPAV
DRLCLGIPRGECFGLLGVNGAGKTTTFRMLTGDTTITHGEAYLNQFSVLTEMERVHQLMG
YCPQFDAISDLLTGREHLEFYARLRGVKEENVAKVADWGVRKLGLIQYAEREAGGYSGGN
KRKLSTAISLIGAPPVIFLDEPTTGMDPKAKRFLWNCILSVVKEGRAVVLTSHSMEECEA
LCTRMAIMVNGRFRCLGTVQHLKNRFGDGYTIILRLSMPSQEPCLVDSYLKRAFPGIELK
EKHQNVLQYQLPSHACSLAYVFDVLSNNYEELGVSDYSVSQTTLDQVFVNFAKEQSDDDQ
LREVTVNGAVQTTQSNRLLPSRPVKPTTSGPTSPTRSQTSQSSPQHKAAVITSQSSSPTR
EPSRSESPSQSSHAGQSFSPVRAAQPSQSPTLGVAAQPSRLPSPSRAAQPGGSPKSPRSG
VREGPSDGAKSKGKDIPMTRLPKAKKESSGNKSKRKGEASEDSKDPTKLFLVATTQDSEV
NT seq
7203 nt
NT seq
+upstream
nt +downstream
nt
atggggatctgcacacagttgctgcttctactttggaagaacatcacatatcgtaggagg
aacaaggtccagctgctcattgagatactatggcccctgtttctcttcctcatcctcatc
gccgtgcgacgctcccaccccccatacaaacagagccagtgtcacttccccaacaaagct
ctgccctccgctggcacgctagcatgggttcaaggcatcgtttgcaacatcaacaatccc
tgcttccaccagcccacacctggagagatgcctggccaagtgggcaactttgacaactca
atactttcccggattctggtggaaacgaggacggcattggcctacagcagcaaccagacg
gccttccatggatttcaggagctcctggacgtcgctcagagacttggagagcggcccgag
gcttggccaaatttgcctgtgggggagtacctgcgcgcaaacgaaaccttctccaacttc
ctcgtcaccaatggcagcctcccacggcctgcccttgacgcgctgcttagggcgcggctc
aacttccaggtggtgtccctgtctggggcagggatgcgtctggcagacatcgtgtgcaac
gcgtccctgctggagcgctttctgactgtggaggggggcgactccatgacggagctgcag
gccagcttgtgtgcggttgacccggacacactgcagcaggctgagcagctcttcctttcc
cagctggactacagcaagatattcacgagagaaaggctgagagcaaatgtgggagagctg
agggcgctaagccaggccgtgacttctgtgtctcaagaagttgcaggaatcttggatgat
ttatcagggttgtcgggtttctcggacttgaactcggagctgaggttgctgtctccagag
aaccgcacggaagctccgctgcagagcttccgcgcctttagccgcatcgtctgcggtcac
ccggagggaggcgtggagcgcatcccgtccttcaactggtacgaggaccaagacgtcaag
tccttcctgggccgaaacggcacggaagaggacgacctggataacgacaatgtcaccact
cccttctgtaaaagcgtcattcagaacttggagtcaaaccccctctcccgcatcgtgtgg
cgagggatcaagcccctcttcattgggaagctgctgtacacgccagacactcctgcagtc
agggaggtcatgaaggaggtgaataagacctttcaggacctgcagattcttcaggaccta
aagggggcctgggaagagatcggacctcgtgtgaaaaccttcatggagagcagtgtggag
atccgacttctgcaggacctgctgaggcggccagaggtggcggtcctggtgaacatgcgt
ctggagaacacttcctggacggcgtcgcggatcacccgcttcctgtccacgccgtcgcct
gacacgccacgcaaagaaggggcgccacccacctggtttgacatcttccaggatgtaaac
cacaccatcagcaccctgggccagatcactgaatgcttctctctagataaattggaaggt
gctgccacagaagggcagatgattgacagggccctggagctcttggaggacaggcagttc
tgggcagggattgtttttctccttccggatccttccgctcccaccctcccccctcacgtg
tcttacaagatacgcatggacatagatgatgtcacgcggacaaataagatcaaagacaag
ttctgggatccgggtccggcagcagagcccttcagtgacatgcgctacatctggggcggc
tttgtgtacgtgcaggacctggtggagcgggggctgactcgagtcatgaccggcaaggag
cagaacacaggtgtctacctgcagcagatgccctacccgtgcttcgtggacgacgttttc
ctgcgcgtgctgaaccgctcgctgcccatgttcatgacgacggcgtggatgtactcggtg
gccatgatcatcaagtgtgtggtgtacgagaaggaggcgcgcctcaaggagaccatgagg
attatgggattgggctcgggcacactgtgggtcagctggttcatcagcagctatgtgccc
ttcctggtcagcgcaggcctgctcgtctctctgctacagtatggggacatcctgccatat
agtgaccccgtggtggtcttcttcttcctggctgcctttgccacggccaccatcctgctg
tgcttcctcatcagcaccttgttctcgcgggccaacctggcgtcggcgtgcgggggcctc
atctacttctcgctctacctgccgtatgtgccgtgcgtcgcctggagagatcacctcacc
accacacaccgcgtccttttaagctttctgtctccagtggcgtttggctttggctgcgag
tacttctcccagtatgaggagcagggagtgggcatccagtggttcaacatcaactccagc
cccttggagggagacacctacagcttcgtcacctccatcgtcatgctctatgtagatgca
ttcatctatggtgtactggcctggtacatagaggccgttttcccgggtgagtttggggtc
cctaggccctggtacttcatcttccagctcaactactggggcggaataccgctggagatg
ggcatgcccatccccccagcccccagggacgagcagaacgaacgagtggagccagagccc
cagaacctcgttctgggtgtggccatccgcgacctggtcaagatttacaagaatggaggg
aaactggcggtcaatcacctcaatctcaagttctatgagggtcagatcacctctttcctg
ggccacaacggcgcagggaagaccaccacaatctccatcctgacagggctgtttcccccc
acggcggggacgatgtacgtgaggggcatggacatccgcagggacatggagtggatcagg
aggacactgggggtctgcccgcagcacaacgtcctctttgacatcctgacggtggaggag
catgtgtggttctacggccggctgaagggcttgaacaacacggaggtgatggaggagacc
acctctctgctggacgacgtgggtctgctgcacaaacgccacgaggaaacgcgcaacctg
tcaggggggatgaagaggaagctgtccgtggccattgccttcatcggcggctccaaggtg
gtggttctggacgagcctactgctggagtggacccctactcccgccgggccatttgggac
ctgctgctgaagtaccgcaaagaccgcaccatcatcttgtccacccactacatggacgag
gccgagttgcttggtgaccgcatcgccatcatctcccaggggaagctgtgctgctgtgga
actcccctctacctcaagtccaagctgggcactggctattacctcacggtggtcaagaag
gaggtggacagtcggacgcccagcaccagtgccagtgccggaaagctctctctgcctcca
gtgcctaaggacagtgactcatccctaagtgacgacactggactaggaagcgaggagaat
ggccctgacgtgcctgccctggtggccctggcgcagcaccacatgcccgaggcgcgtctg
gtgcaggacctgggccgcgaggccatcctcaacctgccgcaccgctcggccgaggacggc
agcctggcgctcttcctgtccgagctggagaagaggcaggccgacatgggcatcaccagc
tacggcctgtccgacaccaccctggaggagattttcctgaaagtagcggaggagacgggg
gtagacgtggaccccgccgagcctgagaggccgccctcgtcaccacggcaacgacgacct
gacccacccgaggaacgagagccagagcccaaggagacggacctgctgagcgaggagggt
cgaggcggcgacccggccacgggctggtggctcacctggcagcagctgcgggcgctcttt
gtcaagaggtggctgtacgcccggcggagccgcagagggttcatcgctcagatcgtgctg
cctgccctgtttgtcctggtcgctctgttcttcagcctgctcgccccaccctttgggaag
tacccggccctgaagctgcagccctggatgtacggagatcagtacacgttctacagcaat
gacgccccaacggacccagaaattcagaacctcctcgacgccttgcttgaccctccaggt
tttgggaccaaatgcatggacgcggaaatggatccggctgtgaacaccacctgtagccaa
gacccgggctccaggttcctgcgtccccagatcccgtactccacgtggcagctgctgggg
aagggcaactggacggcggcgctgccctctcctgagtgtgagtgcagcacagaggaggtg
cgccgcatgctgcccgactgccccgagggagccgggggcctgcccccaccacagattaag
cgactcactggagacgtcctgcagaacctgactggtcgtaacatctccgattacctggtt
aagacttatccccagattctcaagaaaagtatgaagaccaagcggtgggtgaatgaattc
aggtatggaggcttctctctgggtgggaaggcctcacagcccatctcagaaggccactac
ctggatgagcctgtcatggccatcagatcacgctacagagtacctgagaacagttccttt
gacaacctcctccacaggctgccaggctttctaagcggcctgaaccgcgagcagaacgtg
aaggtgtggttcaacaacaaggggtggcatgccatggtgtccttcgtcaacgtgctgaac
aacgggctcctgcgcgccaacctgccgcccggcgtggacaagaggctctacggcatcacg
gcctacaaccacccgctcaacctcaccaaggagcagctcagtgaaatggccctgatgact
acctctgtggatgtactggtgtcgatctgcgtcatatttgccatgtcctttgtgccggcg
agttttgtgctctttctgatcgaggaacgtgtcagcaaagccaagcacctgcagtttgtc
agtggagtgaaaccggtcctgtactggctggccaactacacctgggacatgctcaactac
tctgtgtcagccaccatggtggtgctcatcttcatctgcttccagcagcagtcctacgtc
tcggagaccaacctgcccgctctggtcctgctgcttatgttctatggctggtccatcaca
ccgctcatgtacccggcctctttcctgtttgaggtgccaagcacagcctacgtggtcctc
acctccgttaacctcttcattgggatgaacggtagcattgccacatttgtcctcgagctg
tttgtggatcagcatttaaatgacgtcaacaagattctgaagaaggtcttcctgattttc
ccacacttctgcctgggtcgagggctcattgacatggcgaagaatcaggccatggctgat
gcatttcagagactcggtgccaagaagtcactagatccactggagtgggattttgttggg
aagaatttatttgcaatggcggttgaaggagtggtgttcttcatattcactattctacta
cagtatggcttcttctgcaaattcaggccctggtctgacccagtgctgccccctcttggc
ccagaggatgatgacgttgccaaagagagagacagagtacgcaacggaagagcacaggga
gacctactgtccatgaaagacctgagcaagatatacaaagcagggaggaagccagctgtg
gatcgcctgtgtctggggatccctcgtggggagtgttttggtctactcggagtgaacggt
gctgggaagacaacgacattccgcatgctgacaggagacaccactatcacccatggagaa
gcttatctcaatcagttcagcgtgctgacggagatggagcgggtccatcagctcatgggc
tactgcccacagtttgatgccatcagtgacctgctcacaggtcgggagcacctggagttc
tacgcccgcctgcggggggtgaaggaggagaacgtggcaaaggtggccgactggggcgtg
cggaagctgggtctgattcagtatgctgagcgggaagcaggaggctacagcgggggaaac
aaacgcaaactctccactgccatttccctgattggagctcctccagtgatattcctggat
gagccgaccacgggcatggaccccaaagccaagcgtttcctctggaactgcatcctgagt
gtcgtcaaggagggcagagccgtggtgctcacctctcacagcatggaggaatgtgaagcc
ctatgcactcggatggccatcatggtgaatggcaggtttcggtgtctggggacagtgcaa
catctcaagaacaggtttggggacggctacacgatcatcctgcggctctccatgccctcg
caggagccctgcctggtggactcctacctcaaacgggccttcccgggcatcgagctgaag
gagaagcaccagaatgtgctgcagtaccagctgccttcgcatgcgtgctctctcgcctac
gtcttcgacgtgctctccaacaactacgaggagctgggcgtgtccgactactccgtctct
cagaccactttggaccaggtttttgtcaactttgctaaagaacagagtgatgacgaccag
ctcagagaggtgacggtaaacggtgctgttcagaccactcaatccaaccggctgctacca
agccgaccagtaaaaccaacaaccagtggacccacgtcaccaaccaggtctcagacgagt
cagtcttccccacaacacaaggcagctgtcatcactagccagtcgtcatctcccacccgc
gaacccagccggtcagagtcaccaagccagagctctcatgccggccagtccttctcacct
gtcagggcagctcaacctagccagtcgccgacactcggtgtggcagctcaaccatcccgg
ttaccctccccgagtagggcagctcaacccggtggatctcccaaatcgcccaggtccggg
gtcagagagggcccctccgatggggcaaaaagcaagggcaaggacatcccaatgacaaga
ctgccaaaggccaagaaagaatcctcaggcaacaagtcaaaacgtaaaggagaggcttca
gaggacagcaaagatcccaccaaacttttcctggttgcaaccacgcaagacagtgaggtc
tga
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