Sardina pilchardus (sardine): 134059501
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Entry
134059501 CDS
T10667
Symbol
dennd4c
Name
(RefSeq) DENN domain-containing protein 4C
KO
K20163
DENN domain-containing protein 4
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spil04131
]
134059501 (dennd4c)
Membrane trafficking [BR:
spil04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
134059501 (dennd4c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
PPR_2
PPR_3
PPR
PPR_long
DUF2464
Motif
Other DBs
NCBI-GeneID:
134059501
NCBI-ProteinID:
XP_062371920
LinkDB
All DBs
Position
16:complement(25994899..26081353)
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AA seq
2039 aa
AA seq
DB search
MMEDKGHRVSDYFVVAGLTERSAPLEQDLSEAKAGGPKAPICELAVINRSAGETVPEGFT
CIEVTPGGQPANLNHGSLKSPELFLCYKRGRSKPPLIDIGVLYEGKERLIQGCEIIQATP
FGRCANVNNSSATSQRIFITIRRDRPVQPQNSLSVTDICVIITNKGETPPHTFCKVDKNL
NCGMWGSSVFLCYKKSVSASNSIAYNAGLIFRYPEEDYESFPLSESVPLFCLPMGAKIEC
WAPNTPYPLPVFSTFVLTISSGEKVYGAAIQFYEAYPLEQLSDRQRQQLGLVTAVEKKLI
TNRPVNTNKCICLLSRWPFFEAFRKFLLFLYKLSVSGPHPLPIEKHISHFMHNVSFPSPQ
RPRILVQLSPHDTLILSQPVCTPLPLSGADYRTLLMNLGAENCAIVLHFVLMESKILLHS
LRPAVLTGVAEAVVAMIFPFQWQCPYIPLCPLSLAGVLNAPCPFIVGVDSRYFDLYDPPP
DVVCVDLDTNTIYQSDEKRHLNWKNLPKKPCKNLLSSLCNLQNQLALVRRNTPETSAVDM
TPIEADFTWQKKMASLEMEIQESFLRFMATILKGYRSYLKPITEAPSDKATSADSLYDLQ
GFLKSRDRAHQKFYSQLTKTQIFIRFIEECTFVSDKDTGLAFFDDCIEKLFPSDKGTDKG
TKVEGEWSEDTRLMELDESQKSEHTVFVMPPEPPPDDGTDPPARYSYETFPSLCLDLFDR
PRELRPALSSRSAGASLSSSPALLAKRTKQEIKLAVKMAKRYYSNPPLWARCLISHCYSM
WFICLPASVRSAQSKTRAMQQAYTVLLKLRTSEVEMLDEVCYRVVMQLCGLWGMPVMAVR
VLMEMKKAGVHPNAITYGYYNKAVLESTWPSQNRSGLFMWTKVRNVLRGVAQFKQAIKGS
SSPEEGALIPSIVLVDGRVRSAEVDRLSHGSGDSSSEPNGDEHVLFSHTITTDNHCSNTG
GQSDQGYGSKDELHQELNSSVLPAPIQPINSKASPTHTGGDIAGSVDSAVAVTTPPSPAD
VVPPPPSIVKLSTGSFDSTAGGGGGSKLFKPRSKSEDVALPEDDVCLPSVAVTTDSSSSS
SSVPGVAGPSPSPGASSSASGGGGAAVGTVAGATRAKAFAERSCSFSAESRAGMLSKKGS
LDQLTMAAHMGADARILTHALTGGAKTPPPGHTHTHTHTHTPGGTPTPTPGGGGTACFSF
PEQEGEEEEEEEEEEEEEEASAHTPTPREEQEEEEEADKEEAEPDEADGGEQASGSEVTT
PSMVARSISTISSTSTTSRVAERLDVEAGSDPLSLLVSESEDAVSVQSQESQTGGAAAPQ
TPQRQLAHEIELYMSLGAKASASNTDLAQNTPPQGASDATDTNATTAAEVSQQPLLHPAP
PSSSSSSSLAKQPLERRSSLPAAPPPRPPPPGSTGSTPKRSPATVSRSKTFAVKSSRTAT
TPTTALQSPSRSLTAPSVTLSALVRSSQSGSLGSVMNSISGIKMDALLSGPKMDVIKSGM
KQAATVASKVWGAVASAYSYSDDEDEQGQQRDGFPARLDDQFLAGEGSGVEGSVPRGLIP
SLASNGLTHSSTSLHSSSGSSDTHHNTPMTPGRSMRGGDSEHSSSHHASSSSIYQNCSLE
VLMSSCSQCVKCECLVYDEQIMAGWTADDSNLNTTCPFCQSAFLPLLHVEFHDLRPPSGF
YLKPSESGDSLPGAQPITTSEQKVGSTPNPTNSSDLMSFPESTEEGEEDEEAASSRAGAQ
KTLVLEPAQSDPLGIVEKRGTSLTRSNSVGGPLQSLSGSQRPNHGISTTSLPNSLHDVAD
SLGQKRPNPKPVSVPYLSPLVLRKELESLLENEGDQVIYTHKFLSQHPILFWNLLWYFRR
LDLQSNLPGLILTSEHCNNGVQLPQTSLSADSKQVYIQLLWDNTNLHQEPSEPLYMLWRS
FMERKGTLDPSDHQETRTLLNSIVRSIQTNDVYSPINVLLREVKRHPEVKRQRSIYREIL
FLALVSLGRENIDVEAYDREYRQAFDELSAEQRKALAPMDWPPNKSVQWCLKTFGAPFI
NT seq
6120 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggacaagggccaccgcgtgagcgactacttcgtggtggcgggcctgacggag
cgctcggcgccgctggagcaggacctgtcggaggccaaggcgggcgggcccaaggcgccc
atctgcgagctggcggtcatcaaccgctcggcgggcgagacggtgcccgagggcttcacc
tgcatcgaggtcacacctggcggtcagcccgccaacctcaaccacggcagcctcaagagc
cccgagctcttcctgtgctacaagaggggccgcagcaagcccccgctcatagacatcggc
gtcctgtacgagggcaaggagcgcctgatccagggctgcgagatcatccaggcgacgccg
ttcggccgctgcgccaacgtcaacaacagctcggccacgtcgcagcgcatcttcatcacc
atccgccgcgaccggcccgtgcagccgcagaactcgctctccgtcaccgacatctgcgtc
atcatcaccaacaagggagagacaccgccacacaccttctgcaaggtggacaagaacctc
aactgcggcatgtggggatccagtgtttttctttgctacaagaagtcagtgtctgcctcc
aactccattgcttacaatgccggcctgatctttcgctacccggaggaggactacgagtcg
ttcccgttgtctgagtcggtgccgctgttctgcctgcccatgggtgccaagatcgagtgc
tgggcgcccaacacgccctacccgctgcccgtcttctccaccttcgtcctcaccatctcc
tccggcgaaaaggtgtacggcgctgcgatccagttctacgaggcgtaccctctggagcag
ctgagtgatcgccagaggcagcagctgggcctggtgacggcggtggagaagaagctcatc
accaaccggcccgtcaacaccaacaagtgcatctgcctgctgtcccgctggcccttcttc
gaggccttccgcaagttcctgctcttcctctacaagctctccgtgtccgggccgcacccc
ctgcccatcgagaagcacatctcccacttcatgcacaacgtgtccttcccctccccacag
agaccccgaatactggtccagctttctccacatgacaccttaatcctgtctcagcctgtg
tgcactcctctgcctctgagtggggctgattaccggacgctgctgatgaatctgggggct
gagaactgtgccatcgtgctgcacttcgtgctgatggagagcaagatcctgctgcactcc
ctcaggcctgccgtgctcaccggggtcgccgaggccgtcgtggccatgatcttcccgttc
cagtggcagtgcccgtatatccccctgtgccccctctccctggcgggcgtgctcaacgct
ccctgccccttcatcgtgggcgtcgactcacgctactttgacctctacgaccccccgccg
gacgtggtgtgtgtggacctcgacactaacaccatctatcagtcggacgagaaaagacac
ttgaactggaagaatctcccaaagaagccgtgcaagaatctcctcagctccctgtgcaac
ttgcagaaccagctggcacttgtgcgtcgcaacacccctgagacctctgcggtggacatg
acgcccatcgaggcggacttcacgtggcagaagaagatggcgtctctggagatggagatc
caggagtccttcctgcgcttcatggccaccatcctcaaaggctaccgctcctacctcaag
cccatcaccgaggccccctcggacaaggccacctccgcagactccctctacgacctgcag
ggtttcctgaagagtcgtgaccgcgcgcaccagaagttctactcgcagctgaccaagacg
cagatcttcatccgcttcatcgaggagtgcaccttcgtcagcgacaaggacaccggcctc
gccttcttcgacgactgcattgagaaactctttccatccgacaaaggaacggacaagggg
acaaaggtggagggggagtggtctgaggacactcgtctgatggagctggacgagtcccag
aagagcgagcacacggtgttcgtcatgcccccagagccccccccagacgacggcaccgac
ccccccgccagatacagttatgagacgtttccttccctgtgtctggacctgttcgatcgt
cctcgtgagctgcgtccggctctgagcagtcgctccgcgggggccagcctgtccagtagt
cccgccctcctggccaagaggaccaaacaggagatcaagctggcggtgaagatggcgaag
cgttactatagcaacccgccgctgtgggcgcgctgcctgatcagccactgctacagcatg
tggttcatctgcctgcccgccagcgtgaggtccgcccagtccaagacccgcgccatgcag
caggcctacaccgtgctgctcaaactacgcacctccgaggtggagatgctggacgaggtg
tgctaccgtgtggtcatgcagctgtgtggtctgtggggaatgcccgtcatggcggtcaga
gtgctcatggagatgaagaaggctggtgtccaccccaacgccatcacctacggatattac
aacaaggcggttctggagagcacatggcccagtcagaaccggagcggtctgttcatgtgg
accaaagtgcgtaacgtgctccgaggagtggcccagttcaagcaggccatcaagggctcc
tccagccctgaagagggcgccctcatcccctccatagtgttggtggacggcagggtgcgc
tctgcagaggtggaccggctgagtcacggcagtggggacagctccagcgagcccaatgga
gacgagcacgtgctcttctcacacacaatcaccacggacaaccactgcagcaacacaggg
ggtcagtcggatcagggctacggctccaaagacgagctccaccaggagctgaactcctct
gtgctgcccgctcccatccagccaatcaacagcaaggctagccccacacacactggtggg
gacatagctggttcggtggacagtgcggtcgccgtgacaacaccgcccagtcctgcggac
gtggtgccccctcccccaagcatcgtcaagctctccaccggcagcttcgacagcaccgcc
ggcggtggaggtggcagcaagctcttcaagccgcgcagcaaaagcgaggacgtcgccctt
cccgaggacgacgtttgcctcccctccgtcgccgtgactacagactcctcctcctcctcc
tcctccgtccctggcgttgccggtcccagtccttcgcccggggcctcgtcgtccgccagc
ggtggcggtggtgccgccgttggcacggttgccggggcaacgcgcgccaaggcgtttgcg
gagcgcagctgcagcttcagcgcggagagccgtgcggggatgctcagcaagaagggcagt
ctggaccagctgaccatggccgcccacatgggggccgacgcgcgcatcctcacacacgcg
ctgaccggaggagccaagacgccgccgcccggtcacacacacacgcacacacacacacac
acgccaggcgggacgcccacacccacgccgggaggaggagggacggcgtgcttctctttc
ccagagcaggagggggaggaggaggaggaggaggaggaggaggaggaagaggaggaggcg
tcggcacacacgcccacacccagagaggagcaggaagaggaggaggaggctgacaaggag
gaggcggagcctgacgaggcggacggcggagagcaggcctcagggtcagaggtcacgacc
ccgagcatggtggcgcggagcatcagcacgatctcgtcgacctcgacgacgagccgcgtt
gccgagcgactggacgtggaggcgggctcggacccgctgtccctgctggtgtcggagagc
gaggacgccgtgtccgtgcagagccaggagtctcagacggggggggccgcggccccccag
accccccaacgccagctggcccacgagatcgagctctacatgagcctgggcgccaaggcg
tccgcgtccaacacggacctcgcccagaacacaccccctcagggcgcttcggacgcgacc
gacaccaacgccaccaccgccgccgaagtatcccagcagcctctgcttcaccctgctccc
ccgtcatcgtcatcgtcatcgtcgctggcgaagcagccgctcgagcgtcgctccagcctc
ccggccgcgccccctccgagacctccgccgccgggcagtacgggcagcacgcccaagcgc
agcccggccaccgtctcgcgctccaagaccttcgccgtcaagtccagccgcacggcgacg
accccgacaacagcgctgcagagcccctcgcgctcgctgaccgcgccctcggtcacgctg
tcggcgctcgtacggtcgtcgcagagcggctcgctcggctcggtcatgaactccatctcg
ggcatcaagatggacgcgctgctctcgggccccaagatggacgtcatcaagtccggcatg
aagcaggccgctacggtggccagcaaggtgtggggcgcagtggcctccgcatacagctac
tccgacgacgaggatgagcagggtcagcagcgtgacggtttcccggcgcgtcttgatgac
cagttcctggcgggggaggggtcaggagtggagggttccgtcccccgaggcctcatcccc
agcctggcctccaacggcctcacacactcttccaccagcctgcacagcagcagcggcagc
agcgacacacaccacaacacacccatgactccaggacgctcgatgagaggcggagactca
gagcatagctcctcccatcacgccagctcctccagcatctaccagaactgctccctagag
gtgttgatgtccagctgttcccagtgtgtgaagtgtgagtgtctggtgtatgacgagcag
atcatggcgggctggacggccgacgactccaacctcaacaccacctgccccttctgccag
agtgccttcttgcccctgctccatgtggagttccacgacctacgcccacccagcggcttc
tacctgaagccaagtgagtctggcgacagcctcccaggcgctcagccaatcaccacctcc
gaacagaaggttggctccacccccaaccccaccaactccagcgacctcatgagcttccca
gaatccaccgaggagggagaggaggacgaggaggccgccagcagtcgcgctggcgcacag
aagacgttggtgctggagccggcccagtcggaccctctgggcatcgtggagaagcgcggc
acctctctgacccgcagcaacagcgtgggcgggcccctgcagagcctgagtggcagccag
cggcccaatcacggcatctccaccaccagcctgcccaatagcctgcacgatgtggcggat
tccttggggcagaagcgtcccaatccgaagccggtgtcggttccgtacctgagtcctctg
gtcctgaggaaggagctggagtctcttctggagaacgagggggaccaggtgatctacact
cacaagttcctgagtcagcaccccatcctgttctggaaccttctgtggtatttccggcgc
ctggacctgcagagcaacctgccaggactcatcctcacgtccgagcactgcaacaacgga
gtccagctgccccagacgtccctgtctgctgacagtaagcaggtgtacatccagctgctg
tgggacaacaccaacctgcaccaggagccctcagagccactctacatgctgtggaggagc
ttcatggagcgtaaagggacgctggacccgagtgaccaccaggagacgcgtacgctgctg
aacagcatagtgcgcagcatccagaccaacgacgtgtactcgcccatcaacgtgctgctc
agggaggtcaagcgccacccagaggtcaagaggcagaggagtatctacagggagattctg
ttcctagccctggtgtctcttggcagagagaacattgacgtggaggcgtatgatcgtgag
taccggcaggcgtttgatgagttgagtgctgagcagcggaaggccttggcccccatggac
tggccgcccaacaagagtgtgcagtggtgcctcaagactttcggcgctcccttcatctga
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