Sardina pilchardus (sardine): 134059705
Help
Entry
134059705 CDS
T10667
Symbol
sf1
Name
(RefSeq) splicing factor 1 isoform X1
KO
K13095
splicing factor 1
Organism
spil Sardina pilchardus (sardine)
Pathway
spil03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134059705 (sf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spil03041
]
134059705 (sf1)
Spliceosome [BR:
spil03041
]
Complex A
Other components
Complex A specific factors
134059705 (sf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
zf-CCHC_3
KH_12
Motif
Other DBs
NCBI-GeneID:
134059705
NCBI-ProteinID:
XP_062372145
LinkDB
All DBs
Position
16:complement(25635040..25650711)
Genome browser
AA seq
685 aa
AA seq
DB search
MATGANATPLGKLHPSIGAKRGFDAGPGAGLMAPPGPPVSFPSLQNFQQPQVPNVSFPQP
LQFAPAAVPTFPVSIPQPGPGMKSPAGVDFGQKKARKKSRWSSETPDQKTVIPGMPTVIP
PGLTRDQERAYIVQLQIEDLTRKLRTGDLGIPVNPEDRSPSPEPIYNSEGKRLNTREYRT
RKKIEEERHALITEMVGLNPEFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRG
NTLKNIEKECCAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQ
IRNILKQGIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQSTEQRSITNTTLCTK
CGGAGHISSDCKFTSTYAPRPGEPPQSAQDKARMDKEYLSLMAELGEAPVPSSGGGGGGH
GGHSSNHNSGPRGSGHGNNHQGPPSRPPWMNSGPSENRNFHNMHGGHGGHGGHGGHHNFP
PPMPSMGAPPMPPNPNGMPPPWMQPPPPPMGQGPAPPGHPMGLLPPPMGMMPPPPPPPNG
QPPPAPSGPLPPWQQQAPPPPPTSMATSAPLPWQQNTTTTSSPGTGNLPPWQQPQQSAAS
ASQPPPPMGTPSMVPPPPGVQPPLPPGAPPPPPPPPPGSAGMMYAPPPPPPPMDPSNFVT
MMGMGVPGMPPFGMPPAPPPPPPQN
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggctacgggagcaaatgcaactcctttggggaagttgcacccaagcattggcgcaaaa
cgaggcttcgacgccgggccgggtgcgggtctaatggctccgccaggccctccagtgtca
tttccttctcttcaaaattttcagcagcctcaggtgcccaatgtttcttttcctcaaccg
ctccaattcgcgcctgctgcagtcccaaccttcccagtctcaatcccacagccaggacct
gggatgaaatcgccagctggagtagatttcggtcagaagaaggcaaggaagaagagtcgt
tggagcagcgagactcctgatcagaagacggttatccctggaatgcccacagtcattccc
cctgggctgacccgcgaccaagagagagcatatatagtccaactgcagattgaagacctg
actcgtaaactgcgtacgggagacctgggaatccctgtaaaccctgaggacaggtctccg
tcgccagagcccatctacaacagcgagggcaagcgcctgaacacccgcgagtaccgcacg
cgcaagaagatcgaagaggaacgccatgccctcatcacagagatggtcggactcaacccc
gagttcaagcctcccgccgactacaagcctcccgccactagggtgagcgacaaggtcatg
atccctcaggacgagtaccccgaaatcaactttgtggggctactgattggaccgcgtggt
aacactctgaagaacattgagaaggagtgctgcgctaagatcatgatccgcgggaagggc
tcggtgaaggagggcaaagtggggcgcaaggatgggcagatgctgccgggggaggacgag
cccctgcacgccctcgtcacagccaacaccatggagaacgtcaagaaggccgtcgagcag
atccgcaacatcctgaagcagggtattgagacacccgaggaccagaacgacctgcggaaa
atgcagctgagggagctggccaggctcaacggcaccttgagagaggatgacaacaggatc
ctccgcccgtggcagagtacagagcagcgcagcatcacaaacaccaccctctgcaccaag
tgtggcggggccggccacatctcctccgactgcaagttcaccagcacctatgcccctcgg
ccaggggagcctccccagtctgcgcaggacaaggcgcgcatggataaggagtacctgtcg
ctcatggcggagctcggcgaggcgcccgtgccctcctccggcggcggtggcggcggccac
ggcggccactccagcaaccacaactccggcccccgcggctctggacacggcaacaaccac
cagggcccgccgagccggccgccctggatgaactcgggcccgtctgagaacaggaacttc
cacaacatgcacggcggccacggaggtcacggaggtcacggcgggcaccacaacttcccg
ccccccatgcccagtatgggagctccccccatgccgcccaaccccaacgggatgcccccg
ccgtggatgcagccgccacctccgcccatgggccaggggcctgctccccccggacacccg
atgggtctgctgccaccacctatgggcatgatgccccctcctccccctccccccaacggt
cagcccccaccggccccctctggacctctgccgccatggcaacagcaggccccaccacct
cctcccaccagcatggcgaccagtgcaccactgccgtggcaacagaacaccacaaccacg
tcctcccctggcacgggtaacctgccgccatggcaacagccccagcagtcggctgcctct
gcctcccagccgcctcctccaatgggaacgccatccatggtgccccctcctccaggagtc
cagccccctctgccccccggcgcccctcctcctccccccccaccccctcccggctctgcg
ggtatgatgtatgcgcccccgccgccacctcccccaatggacccctccaacttcgtcacc
atgatgggcatgggggtgcctggcatgccaccttttggaatgccgcctgcaccccctccc
cctccaccacagaattaa
DBGET
integrated database retrieval system
