Sardina pilchardus (sardine): 134059736
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Entry
134059736 CDS
T10667
Symbol
si:cabz01101003.1
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD isoform X1
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04217
Necroptosis
spil04622
RIG-I-like receptor signaling pathway
spil04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
134059736 (si:cabz01101003.1)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
134059736 (si:cabz01101003.1)
04625 C-type lectin receptor signaling pathway
134059736 (si:cabz01101003.1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
spil01002
]
134059736 (si:cabz01101003.1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spil04121
]
134059736 (si:cabz01101003.1)
Enzymes [BR:
spil01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
134059736 (si:cabz01101003.1)
Peptidases and inhibitors [BR:
spil01002
]
Cysteine peptidases
Family C67
134059736 (si:cabz01101003.1)
Ubiquitin system [BR:
spil04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
134059736 (si:cabz01101003.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
UCH
Motif
Other DBs
NCBI-GeneID:
134059736
NCBI-ProteinID:
XP_062372200
LinkDB
All DBs
Position
16:complement(18821573..18840811)
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AA seq
990 aa
AA seq
DB search
MSGVARHQSRRQRPPKMFLVASDMKIQDHLDGTIRVLRGYLCQEQESLERNGKVEQLWVK
VLDNGGMVKIDRHALIEIPPDLAGLLEPVPEPEARLKLHSKPHRLQRLALLSLGSPVSVV
LKQGLAEAELRFRGPLTRGSSAVFFGVQLKGWAAGKGSGNGSYKGHQLFTCPEACALFVP
ASQLTQRRSSHEADATASERHPSHLPAPAPAAHHHHLHHQYQQQQQQQPVSILTRAAESV
PGPAPPQLLQPGQRVMFAQEEATQTGRVAFCGPLPGRTSGGVYVGLILDNPVGLWDGTYK
NHKLCSLPSPQYGHLLPLSKVTPVESRPQKSPPPVVNPKPALKPPSLPPAKPALVPVLPP
FPKPALKPVTAPKPTSPILPDPTPSLPPYHAKVALQPPTKMTPMPPSPPSVAPKSPPLPP
PSNLKPAVRPPPTPLYPSTTDQSHPRSNGLPRPPSPPQPEEVEFEAEEADAGAGLGLEVE
SMVEVNDPPQYGVIRWIGRISGVSELVAGVELDQEITAGTDGSYLGERYFRCPSNKGLFV
KLRSCRRDSRFPAPETRINQVERCNSIAFAEWGSERVEEHTPPVSGPDARQHYNGWKKGI
QGHLNSCYLDATLFSLFSCCSSADSVLFCPPRLQDGAHHSRTAQDLLRCEIVNPLRRYGY
VCASKTMALRKLLEAETTDAGFTNQEKDPEEFLNKLFQLLRVEPLLRIRSMNQQPQECHL
YQLFPPSTPPSPSSPALSPSLSPAPLSPIPLSPPSGHLRVASVQALLEASFIHSGLKFAE
APSCLPLLMPRFGKDFKMFDAILPSLTLDITDLLDETLRQCSICQSLAHWECLQCYEDQD
ITPGRLKQFCHTCNTQVHTHKKRASHHPERVRTPECPWAEQWEGPLSGSRQRLELFAVTC
IETSHYVSFVRHGPQPTDWLFFDSMADREGGENGFNVPQVKACPEVGRYLSLSEEELSRL
DPASLRDTVRRLLCDSYMCLYHCPQISLYK
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggagtcgcacgtcaccaaagcagaaggcagcgtccccccaaaatgtttctggtg
gcgtccgatatgaagatccaggaccatctggatggaaccattcgggtgctacgggggtac
ttgtgccaggagcaagaaagcctggaaaggaatggaaaagtggagcagttgtgggttaaa
gtgctagacaatggcgggatggtcaagattgacaggcacgctctaattgagataccccca
gacctggccggcctactggagccagttccagagccggaggcccgccttaaactacacagc
aaaccccatcggctgcagcgattggctctcctgtctttgggatcgcccgtatccgtggta
ctgaagcaaggattggctgaggctgagcttcgattcaggggaccccttactagagggagc
tcagccgtgttctttggggtgcagcttaagggttgggcggcaggaaagggcagcggcaac
ggctcctacaagggccaccagctcttcacctgcccggaggcgtgcgcactcttcgtgccc
gccagccagctcacccagcggcgctcctcgcacgaggccgacgccaccgcctccgagcgc
cacccgtctcacctgcccgctcctgcccccgctgctcatcatcatcatcttcatcatcag
tatcagcagcagcagcagcagcagccggtgagcatcctgacccgcgcggcggagtcggtc
ccggggcctgctcctccacagctgctgcagccgggccagcgggtgatgttcgcccaagaa
gaggccacgcagacggggagggtggccttctgcgggcccctccctggcaggacctccgga
ggagtctacgtgggcttgatactggacaacccggtaggtctgtgggatggcacgtataag
aaccataagctgtgctccctcccatcccctcagtacggtcacctcctccccctgtccaaa
gtcactccagtggaatccagaccccagaagtccccccctccagttgtgaaccccaaaccc
gccttgaagcccccttccctgccccccgcaaaacccgccctggtgcctgtgctgcccccc
ttccccaaaccggccttaaagcctgtgactgcccccaaacccacctcgccaattctcccg
gaccccacgccgtcccttccgccctaccacgcgaaagtagcccttcagcccccgacgaag
atgacccccatgcctccctcgcccccgagcgttgccccgaaatcgccgccgctccctccg
ccctccaacctcaagcccgccgtcaggccgccgcccacgccactctaccccagcacgacg
gaccaatcacacccgaggtccaacggcctcccgcggccgccctcccctccgcagccggag
gaggtggagtttgaggcggaggaggcggacgcaggggcggggctgggtctggaggtggag
tccatggtggaggtgaacgaccctccgcagtacggggtcatccgctggatcggacgcatc
agcggcgtttctgagctcgtcgctggagtagagctggatcaggagataacggcgggcacc
gacggcagttaccttggcgagcgctacttccggtgcccgtccaataagggcctgttcgtg
aaactccgcagctgtaggcgggactccaggtttcccgcccccgagacgcgcatcaaccag
gtggagcgctgcaactccatagcgtttgcggagtggggcagtgagcgtgtggaggagcac
actccgccagtgtccggcccagacgccaggcagcactacaacggctggaagaagggcatc
cagggacacctcaactcctgctacctggacgccactctcttcagtctgttctcctgctgt
agttctgcagactccgtgctcttctgtcccccgaggctgcaggacggtgctcaccacagt
cgcacggctcaggacctgctacgctgcgaaattgtcaaccccctgcgcaggtatgggtat
gtatgtgccagtaaaaccatggccttacggaaactattagaggcggaaacgacagatgct
ggtttcaccaatcaggagaaagacccagaggagttcctcaacaagcttttccagctcttg
cgggtggagcctctcctgagaatcaggtcaatgaaccagcagcctcaggagtgtcacctc
taccagctcttccctccctccacgcccccctctccatcttctcctgctctctctccatcc
ctctctccggcccccctctcccccatccctctctcccctccgtccggtcacctgagggtg
gccagtgtgcaggcgctgctggaggcctccttcatccactcagggctcaagtttgctgag
gctccttcctgtctgcctctgctcatgcccaggtttgggaaggacttcaagatgttcgac
gccatcctgccctcgcttaccctggacatcacagacctgctggacgagactctgcggcag
tgcagcatctgccagtcgctggcccactgggagtgtctgcagtgttacgaggaccaggac
atcacgcccggccgcctcaaacagttctgccacacctgtaacacacaggtgcacacgcat
aagaagcgtgcgtcgcaccaccccgagcgcgtgcggacccccgagtgcccctgggcggag
cagtgggaggggcctctgagcggcagccggcagcggctggagctcttcgccgtcacctgc
atcgagacgagccactacgtcagcttcgtgcgccacggaccgcagcccaccgactggctc
ttcttcgacagcatggccgacagggagggtggggagaatggcttcaatgtgcctcaagtg
aaggcttgtccagaggtaggccgctacctcagcctatcagaagaggagttgagcaggctt
gaccccgcctccctgagggacactgtccgccggctgctgtgcgactcttacatgtgtctg
taccactgcccccagatcagcctctacaagtga
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