Sardina pilchardus (sardine): 134060130
Help
Entry
134060130 CDS
T10667
Symbol
col4a5
Name
(RefSeq) collagen alpha-5(IV) chain
KO
K06237
collagen type IV alpha
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04510
Focal adhesion
spil04512
ECM-receptor interaction
spil04820
Cytoskeleton in muscle cells
Brite
Exosome [BR:
spil04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
134060130 (col4a5)
Glycosaminoglycan binding proteins [BR:
spil00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
134060130 (col4a5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134060130
NCBI-ProteinID:
XP_062372727
LinkDB
All DBs
Position
16:14178741..14222148
Genome browser
AA seq
1680 aa
AA seq
DB search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 seq
5043 nt
NT seq
+upstream
nt +downstream
nt
atgtctagaaactttaagaatctccagatcctcgctgtaggtctgctgttcatttgcttg
tgggttcaggaatcagaatcagcggcctgccatggctgcactgggtcgaagtgtgactgt
agtaacgtgaaaggagacaagggtgacagggggcttcctggacttcagggccagccgggc
gtacctggattcccaggaccagagggtccgatcggacctcgtggcgagaagggcgatgac
ggacccgggggccccagcggtcccaaaggaataagaggccctcccggattaccaggtttc
ccagggacaccaggaattcccggtctgccaggacaggatggcccccctggacccagggga
actccaggctgtaacggaacaaagggtgagagaggattctccggaacttcaggccttcca
ggaattgagggacaaccaggtcctccaggattccctggccagaagggagaacccggtgaa
gtaattcctgttgaccgctacggacaaaaaggcgaatatggcccaggcggtctcccaggt
cctcgggggattcccggaccttctggacttccagggccgcttggtccccctgggcctaga
ggttatgagggtcgttctgggcctccaggaccacctggaccaaagggaaacatgggactg
aacttccaggggccgaagggagacaagggtgaacaggggcccgtaggacaaccaggacct
cctggacaagtaggagaactgcagagccaaggacaaacaacattccagcaaggagagaag
ggtgaccgcggcccaagtggccctcctggtaatcccggactgcctggaccacctggtatc
tcgggaggatccaaaggagacaaaggagagcctggcgagtatggtaaaagggggaaacct
ggaaaagatggtgacccagggccagctggatttcctggttctaaaggagaccctggtgcc
ccaggattgcctggtcgtgatggcgaaagaggtgacaaaggagaccgtggttaccctggg
cctccaggacaggtggtgacaggtccctcgtcaactgcaacaggccagaaaggagatcgt
ggattccctggaagccctggaagaaaaggagacagaggaccaccaggtttaactggacct
tcaggccagccaggagcaccaggtattggagagccaggtcctgctggtagaccaggattc
cctggcgagagaggccagaaaggtgaagagggacaaccaggagtttctttgccggggcca
cctgggagaagcggagcatcaggattaccgggtcctcctggaccaccaggtcccccagga
tcttccactagtgttgacaactgtgtcagtggtcctccaggtctacctggcctacaggga
gatcgtggatatccaggggagactgggcagaagggtgaaaaaggtgacacatgtgtcaac
tgtttctccagtggaaatcctgtccctggccctgtaggcccaccgggcacacctggactt
ccaggctctcctggatatccgggaactaaaggtgaaagaggctaccccggaggaccggga
tctccaggacctgccggatcacctggacttcagggggcacctggatttactggtgagaag
ggtgatcctggagacgccatatctgtatctggcgtaaagggtgagaagggagactccggt
ttccctggacctgctggcttacctggcctggatggcagacctggacgtgatggaggccct
ggtgcacctggccccaaaggaaatcctggctctctacaaacgaagggacaacctggtccc
tctggagaacctggcactccaggccccccaggtgacaggggttcacctggaggccccgga
tttggtcctcaaggtcctgcaggagagaagggtatccagggagtgtcaggaagacctgga
tccgctggcgcaccaggactaaagggagaacctggccaaaccattgcagagaaaggcgcc
ccaggaccaggaggcagagatggagaacctggtttaccaggaagcccaggcttaccaggt
ggaccaggacaaccaggtttcccaggggtacctggaggaaaaggagacccaggtattcct
ggtattggccttcctggacctcccgggtctaaaggattccctggcagtcctggaacacca
gggacatctggttcttcagggcgaccaggtttggatgggcttcccggtaccccaggaaca
cctggaccaaagggagagccaggttatggtttgccaggcccacagggacctcctggtttc
ccaggtggaaaaggactttctggacctaagggagaccctggctttccaggaaatccaggt
ggtcctgggcgcccagggttaaatggaggccctggcagtaaaggtgacagtggtgttcct
ggtttacctggatctcgtggccctccaggcagccctgcttttggtggtccaggtctgcca
ggtccagctggaggtcctggacctatgggttccccaggatatcccggtgcaaaaggagaa
gctggtaatcctggcctcccagggcaggatatccaagggttgccaggagacagaggtaat
cctggtctccctggatctcctggatctccaggcccaggaggcccacctggcggatctggc
agagatggacttcctggactgcctggtcagaaaggagacatgggtgtaatgggccctcca
ggacctggtggtggccccggtggacccggtggaccaggattcccaggtccaaaaggtgaa
aacggttataatgggagaccaggcaatccaggtacccctggaggaaaaggagagaggggt
gatcctggacttcctggtgctcctggtccttccagtggtcctcaagtctataaaggagtt
aaaggagagccaggcgctccaggtgggggaggtattccaggtcagaagggtatttctggt
cttccaggagatcctggaattccaggtcaggatggacgacccggagtacctggaccttca
ggtcccaaaggagatcctggttttaatggaagccctggtggccctggcgctccaggtgct
aagggagccatgggtgaaatgggattccccggaccatctggacttaagggacttgctggt
acgccaggatcttcaggaagacctggctcacctggatctccaggatttccaggatctaag
ggggatgccggtcttccaggatttggggcaccaggaagcccaggacccaagggtgaacct
ggaactcccggctatccaggaagcccaggacccaaaggacaggctggtggtccaggctcg
ccagggttcaatggtggcccaggagccaagggtgacccagggctaccaggatttcaagga
ccacctggtattcctggtccaaagggtctagatggaatccctggtcccccaggtatcaat
ggaccccctggtaggcctggcgaatcaggccgtcctggatcatctggttacccaggagat
aaaggtcaagctggtcgtgatggaatccctggaccagatgggttgaaaggagatccaggt
cctcctggctttggaacccctggttcccctggtctaccaggattcccaggtccgaaagga
gatatcggccttcctggttcccctggaagtcctggctaccctggaccaaagggcgaggca
ggatttccggggtcacccggaggccctggcggtgttggttctcctggtcctccaggtgtc
actgtgcaggggcctaaaggtaacccgggctctccaggtgctcctggaagacttggtccc
ccaggccctgaaggcccacgaggtctcccaggcagcggaggtgttaagggggagaagggc
ttccctggaacccctggcagcccaggattccctggaccgaagggtgaatatggaccatct
ggattgccggggactccaggtagcccaggattctctggaccgaaaggagataacggactt
cctggtgttccaggattcccaggacccaaaggtctgtcaggtcctggtggtatccgtggt
ccccctggtgaccctggtagctcaggtgctacaggtccccctggtgccccaggtgtggct
ccaactcctattgtcttgaagggagaacctggtcccccaggcaaccccggtctgcctggc
aacagagggcctcctggtccagctggattggaaggcttgtccggcccacccggagaacct
ggaaatcccggccccgaaggccctccaggattcagcggcccccctggaaggaaaggagac
agcggaccagcaggacagccaggtcagcgcgggtaccctggtcctcccggctctgacggc
ttgcaaggccagcctggtctccctggaccggggtcggtggcccacggcttcctgatcacg
cgccacagccagtcttcggacgtcccccaatgccctcagggcaccagtgtcatctacgac
ggctactcactactgtacgtgcagggcaatgagcgcgctcacggacaagatctcggtacg
gcgggcagctgtctgaagcgcttcagcaccatgcccttcatgttctgcaacaccaacaac
gtgtgcaactttgcgtcgcgtaacgactactcgtactggctgtccaccccagagcccatg
cccatgagcatgtcccccatcaccgggagcagcatcaagcctttcatcagcaggtgttct
gtgtgtgaagctccggccatggtgatcgccgtgcacagccagaccatccagatcccctca
tgccctcagacctgggagcccctatggatcggctactccttcatgatgcacaccagcgca
ggggcagagggttcaggtcaggccctggcctctcctgggtcttgtcttgaggagttccgc
tcttcacctttcatcgagtgccatgggcgcggcacctgcaattactacggcaactcttac
agcttctggttggcaactgtggatcaaaatgacatgttcaggaagccacagtcagaaaca
ctgaaagcaggaaacctgtcatcgcgtgtgagccgttgcgtggtctgtatgaagaggacg
taa
DBGET
integrated database retrieval system