KEGG   Sardina pilchardus (sardine): 134060130
Entry
134060130         CDS       T10667                                 
Symbol
col4a5
Name
(RefSeq) collagen alpha-5(IV) chain
  KO
K06237  collagen type IV alpha
Organism
spil  Sardina pilchardus (sardine)
Pathway
spil04510  Focal adhesion
spil04512  ECM-receptor interaction
spil04820  Cytoskeleton in muscle cells
Brite
Exosome [BR:spil04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   134060130 (col4a5)
Glycosaminoglycan binding proteins [BR:spil00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   134060130 (col4a5)
SSDB
Other DBs
NCBI-GeneID: 134060130
NCBI-ProteinID: XP_062372727
LinkDB
Position
16:14178741..14222148
AA seq 1680 aa
MSRNFKNLQILAVGLLFICLWVQESESAACHGCTGSKCDCSNVKGDKGDRGLPGLQGQPG
VPGFPGPEGPIGPRGEKGDDGPGGPSGPKGIRGPPGLPGFPGTPGIPGLPGQDGPPGPRG
TPGCNGTKGERGFSGTSGLPGIEGQPGPPGFPGQKGEPGEVIPVDRYGQKGEYGPGGLPG
PRGIPGPSGLPGPLGPPGPRGYEGRSGPPGPPGPKGNMGLNFQGPKGDKGEQGPVGQPGP
PGQVGELQSQGQTTFQQGEKGDRGPSGPPGNPGLPGPPGISGGSKGDKGEPGEYGKRGKP
GKDGDPGPAGFPGSKGDPGAPGLPGRDGERGDKGDRGYPGPPGQVVTGPSSTATGQKGDR
GFPGSPGRKGDRGPPGLTGPSGQPGAPGIGEPGPAGRPGFPGERGQKGEEGQPGVSLPGP
PGRSGASGLPGPPGPPGPPGSSTSVDNCVSGPPGLPGLQGDRGYPGETGQKGEKGDTCVN
CFSSGNPVPGPVGPPGTPGLPGSPGYPGTKGERGYPGGPGSPGPAGSPGLQGAPGFTGEK
GDPGDAISVSGVKGEKGDSGFPGPAGLPGLDGRPGRDGGPGAPGPKGNPGSLQTKGQPGP
SGEPGTPGPPGDRGSPGGPGFGPQGPAGEKGIQGVSGRPGSAGAPGLKGEPGQTIAEKGA
PGPGGRDGEPGLPGSPGLPGGPGQPGFPGVPGGKGDPGIPGIGLPGPPGSKGFPGSPGTP
GTSGSSGRPGLDGLPGTPGTPGPKGEPGYGLPGPQGPPGFPGGKGLSGPKGDPGFPGNPG
GPGRPGLNGGPGSKGDSGVPGLPGSRGPPGSPAFGGPGLPGPAGGPGPMGSPGYPGAKGE
AGNPGLPGQDIQGLPGDRGNPGLPGSPGSPGPGGPPGGSGRDGLPGLPGQKGDMGVMGPP
GPGGGPGGPGGPGFPGPKGENGYNGRPGNPGTPGGKGERGDPGLPGAPGPSSGPQVYKGV
KGEPGAPGGGGIPGQKGISGLPGDPGIPGQDGRPGVPGPSGPKGDPGFNGSPGGPGAPGA
KGAMGEMGFPGPSGLKGLAGTPGSSGRPGSPGSPGFPGSKGDAGLPGFGAPGSPGPKGEP
GTPGYPGSPGPKGQAGGPGSPGFNGGPGAKGDPGLPGFQGPPGIPGPKGLDGIPGPPGIN
GPPGRPGESGRPGSSGYPGDKGQAGRDGIPGPDGLKGDPGPPGFGTPGSPGLPGFPGPKG
DIGLPGSPGSPGYPGPKGEAGFPGSPGGPGGVGSPGPPGVTVQGPKGNPGSPGAPGRLGP
PGPEGPRGLPGSGGVKGEKGFPGTPGSPGFPGPKGEYGPSGLPGTPGSPGFSGPKGDNGL
PGVPGFPGPKGLSGPGGIRGPPGDPGSSGATGPPGAPGVAPTPIVLKGEPGPPGNPGLPG
NRGPPGPAGLEGLSGPPGEPGNPGPEGPPGFSGPPGRKGDSGPAGQPGQRGYPGPPGSDG
LQGQPGLPGPGSVAHGFLITRHSQSSDVPQCPQGTSVIYDGYSLLYVQGNERAHGQDLGT
AGSCLKRFSTMPFMFCNTNNVCNFASRNDYSYWLSTPEPMPMSMSPITGSSIKPFISRCS
VCEAPAMVIAVHSQTIQIPSCPQTWEPLWIGYSFMMHTSAGAEGSGQALASPGSCLEEFR
SSPFIECHGRGTCNYYGNSYSFWLATVDQNDMFRKPQSETLKAGNLSSRVSRCVVCMKRT
NT seq 5043 nt   +upstreamnt  +downstreamnt
atgtctagaaactttaagaatctccagatcctcgctgtaggtctgctgttcatttgcttg
tgggttcaggaatcagaatcagcggcctgccatggctgcactgggtcgaagtgtgactgt
agtaacgtgaaaggagacaagggtgacagggggcttcctggacttcagggccagccgggc
gtacctggattcccaggaccagagggtccgatcggacctcgtggcgagaagggcgatgac
ggacccgggggccccagcggtcccaaaggaataagaggccctcccggattaccaggtttc
ccagggacaccaggaattcccggtctgccaggacaggatggcccccctggacccagggga
actccaggctgtaacggaacaaagggtgagagaggattctccggaacttcaggccttcca
ggaattgagggacaaccaggtcctccaggattccctggccagaagggagaacccggtgaa
gtaattcctgttgaccgctacggacaaaaaggcgaatatggcccaggcggtctcccaggt
cctcgggggattcccggaccttctggacttccagggccgcttggtccccctgggcctaga
ggttatgagggtcgttctgggcctccaggaccacctggaccaaagggaaacatgggactg
aacttccaggggccgaagggagacaagggtgaacaggggcccgtaggacaaccaggacct
cctggacaagtaggagaactgcagagccaaggacaaacaacattccagcaaggagagaag
ggtgaccgcggcccaagtggccctcctggtaatcccggactgcctggaccacctggtatc
tcgggaggatccaaaggagacaaaggagagcctggcgagtatggtaaaagggggaaacct
ggaaaagatggtgacccagggccagctggatttcctggttctaaaggagaccctggtgcc
ccaggattgcctggtcgtgatggcgaaagaggtgacaaaggagaccgtggttaccctggg
cctccaggacaggtggtgacaggtccctcgtcaactgcaacaggccagaaaggagatcgt
ggattccctggaagccctggaagaaaaggagacagaggaccaccaggtttaactggacct
tcaggccagccaggagcaccaggtattggagagccaggtcctgctggtagaccaggattc
cctggcgagagaggccagaaaggtgaagagggacaaccaggagtttctttgccggggcca
cctgggagaagcggagcatcaggattaccgggtcctcctggaccaccaggtcccccagga
tcttccactagtgttgacaactgtgtcagtggtcctccaggtctacctggcctacaggga
gatcgtggatatccaggggagactgggcagaagggtgaaaaaggtgacacatgtgtcaac
tgtttctccagtggaaatcctgtccctggccctgtaggcccaccgggcacacctggactt
ccaggctctcctggatatccgggaactaaaggtgaaagaggctaccccggaggaccggga
tctccaggacctgccggatcacctggacttcagggggcacctggatttactggtgagaag
ggtgatcctggagacgccatatctgtatctggcgtaaagggtgagaagggagactccggt
ttccctggacctgctggcttacctggcctggatggcagacctggacgtgatggaggccct
ggtgcacctggccccaaaggaaatcctggctctctacaaacgaagggacaacctggtccc
tctggagaacctggcactccaggccccccaggtgacaggggttcacctggaggccccgga
tttggtcctcaaggtcctgcaggagagaagggtatccagggagtgtcaggaagacctgga
tccgctggcgcaccaggactaaagggagaacctggccaaaccattgcagagaaaggcgcc
ccaggaccaggaggcagagatggagaacctggtttaccaggaagcccaggcttaccaggt
ggaccaggacaaccaggtttcccaggggtacctggaggaaaaggagacccaggtattcct
ggtattggccttcctggacctcccgggtctaaaggattccctggcagtcctggaacacca
gggacatctggttcttcagggcgaccaggtttggatgggcttcccggtaccccaggaaca
cctggaccaaagggagagccaggttatggtttgccaggcccacagggacctcctggtttc
ccaggtggaaaaggactttctggacctaagggagaccctggctttccaggaaatccaggt
ggtcctgggcgcccagggttaaatggaggccctggcagtaaaggtgacagtggtgttcct
ggtttacctggatctcgtggccctccaggcagccctgcttttggtggtccaggtctgcca
ggtccagctggaggtcctggacctatgggttccccaggatatcccggtgcaaaaggagaa
gctggtaatcctggcctcccagggcaggatatccaagggttgccaggagacagaggtaat
cctggtctccctggatctcctggatctccaggcccaggaggcccacctggcggatctggc
agagatggacttcctggactgcctggtcagaaaggagacatgggtgtaatgggccctcca
ggacctggtggtggccccggtggacccggtggaccaggattcccaggtccaaaaggtgaa
aacggttataatgggagaccaggcaatccaggtacccctggaggaaaaggagagaggggt
gatcctggacttcctggtgctcctggtccttccagtggtcctcaagtctataaaggagtt
aaaggagagccaggcgctccaggtgggggaggtattccaggtcagaagggtatttctggt
cttccaggagatcctggaattccaggtcaggatggacgacccggagtacctggaccttca
ggtcccaaaggagatcctggttttaatggaagccctggtggccctggcgctccaggtgct
aagggagccatgggtgaaatgggattccccggaccatctggacttaagggacttgctggt
acgccaggatcttcaggaagacctggctcacctggatctccaggatttccaggatctaag
ggggatgccggtcttccaggatttggggcaccaggaagcccaggacccaagggtgaacct
ggaactcccggctatccaggaagcccaggacccaaaggacaggctggtggtccaggctcg
ccagggttcaatggtggcccaggagccaagggtgacccagggctaccaggatttcaagga
ccacctggtattcctggtccaaagggtctagatggaatccctggtcccccaggtatcaat
ggaccccctggtaggcctggcgaatcaggccgtcctggatcatctggttacccaggagat
aaaggtcaagctggtcgtgatggaatccctggaccagatgggttgaaaggagatccaggt
cctcctggctttggaacccctggttcccctggtctaccaggattcccaggtccgaaagga
gatatcggccttcctggttcccctggaagtcctggctaccctggaccaaagggcgaggca
ggatttccggggtcacccggaggccctggcggtgttggttctcctggtcctccaggtgtc
actgtgcaggggcctaaaggtaacccgggctctccaggtgctcctggaagacttggtccc
ccaggccctgaaggcccacgaggtctcccaggcagcggaggtgttaagggggagaagggc
ttccctggaacccctggcagcccaggattccctggaccgaagggtgaatatggaccatct
ggattgccggggactccaggtagcccaggattctctggaccgaaaggagataacggactt
cctggtgttccaggattcccaggacccaaaggtctgtcaggtcctggtggtatccgtggt
ccccctggtgaccctggtagctcaggtgctacaggtccccctggtgccccaggtgtggct
ccaactcctattgtcttgaagggagaacctggtcccccaggcaaccccggtctgcctggc
aacagagggcctcctggtccagctggattggaaggcttgtccggcccacccggagaacct
ggaaatcccggccccgaaggccctccaggattcagcggcccccctggaaggaaaggagac
agcggaccagcaggacagccaggtcagcgcgggtaccctggtcctcccggctctgacggc
ttgcaaggccagcctggtctccctggaccggggtcggtggcccacggcttcctgatcacg
cgccacagccagtcttcggacgtcccccaatgccctcagggcaccagtgtcatctacgac
ggctactcactactgtacgtgcagggcaatgagcgcgctcacggacaagatctcggtacg
gcgggcagctgtctgaagcgcttcagcaccatgcccttcatgttctgcaacaccaacaac
gtgtgcaactttgcgtcgcgtaacgactactcgtactggctgtccaccccagagcccatg
cccatgagcatgtcccccatcaccgggagcagcatcaagcctttcatcagcaggtgttct
gtgtgtgaagctccggccatggtgatcgccgtgcacagccagaccatccagatcccctca
tgccctcagacctgggagcccctatggatcggctactccttcatgatgcacaccagcgca
ggggcagagggttcaggtcaggccctggcctctcctgggtcttgtcttgaggagttccgc
tcttcacctttcatcgagtgccatgggcgcggcacctgcaattactacggcaactcttac
agcttctggttggcaactgtggatcaaaatgacatgttcaggaagccacagtcagaaaca
ctgaaagcaggaaacctgtcatcgcgtgtgagccgttgcgtggtctgtatgaagaggacg
taa

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