Sardina pilchardus (sardine): 134061908
Help
Entry
134061908 CDS
T10667
Symbol
usp6nl
Name
(RefSeq) USP6 N-terminal-like protein isoform X1
KO
K20133
USP6 N-terminal-like protein
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spil04131
]
134061908 (usp6nl)
Membrane trafficking [BR:
spil04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
134061908 (usp6nl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF7328
Motif
Other DBs
NCBI-GeneID:
134061908
NCBI-ProteinID:
XP_062373720
LinkDB
All DBs
Position
17:9478766..9564169
Genome browser
AA seq
990 aa
AA seq
DB search
MQVLQIVKELVSPSRRRAAARFGASDTEQDAAAKLEQERAEIVAKYDKGKEGATVEPWED
ANFHLYKVIDRFGFLHENELPSYDSVEEKQKHQEVERTSKWLKMLKSWDKYKNSDKLMRR
IYKGIPLQLRGEVWCLLLDIPKIKEEKKDFYEKLKHRARGLSPDIRQIDLDVNRTYRDHI
MFMHRYDVKQQALFHVLTAYSIYNTEVGYCQGMSQITALLLIYMNEEDAFWALVKLLSGQ
KHSMHGFFVPGFPKLMRFQEHHDRILKKMMPKLKQHLDTQEVHTSLYTMKWFFQCFLDRT
PFTLTLRIWDIYILEGERVLTAMSYTVLKLHKKHLLKLPMEDLVEFLQVALSKDFFFEDD
FVIEQLQNSMSELRRAKLELPPPAKEEEFPKKPLGQLPPEPLTNHVANGQTPGGQAVVDG
PMTAALRGPSLANQSLSVPAEAGPTPSPSPDRPKDGRPPSRTRRDSLDKLLRLAKAASGG
GDRSGGGRNRSSGGSSDVESRKHQSSGPSPPNATSTPDWGPHKPQGQQQQQQATPPHHHA
SANHNSNAGSSARHERPERPYTPRWVKPSDSKLEAAKAAAMRETHHSRAASPAPAPPLTP
TTPTADPAALGQGASGRRPRSHGFAPGSNRASNASQYDNVPGPDGLPVMEVLELEHPPSR
PPLRQSPTRPPSGGFSSSAPTRQPKPNMAAAAVPLPMHASNSRVGLSGGVSSAHQSPHHF
YPPPSGGQHSPARVPMAPLYTTFGVDARSPEERPVYGLSYGERAGGYATTQRHPHGGGLS
PEKVLMNNMYATYRRQPNPSTHHLQQQQQQQQQQQHPHTHRPPLSVAPLDLSAHLDTSVV
SAGSGDGGHFGGQYLPQRQHTAYQPVEYRYDARRRGGDESAAYLPEVRGGWGVREGEMPP
KSPGGLPRSPSFQKAQMSPMQEFIFPPLPGEDAVLGSVYRGGYHHQPQNQHQEQLPPGAG
RQPQLPHLFGGVHYSHAAQEAFAMQESMLL
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtgctccagatcgtcaaggagctggtgtcgccgtcacggagacgagccgcggcc
agattcggagcttctgacacagagcaggatgctgcagcgaagctggaacaggagcgggcg
gagatcgtggccaaatatgacaagggaaaggagggagcgacggtggaaccgtgggaggat
gccaatttccacctgtacaaagtcatcgaccgctttggcttcctgcatgagaatgaactg
ccatcatacgactcggtggaggagaagcaaaagcaccaggaagtcgagaggacctcaaaa
tggctcaagatgttgaagagctgggacaagtacaagaacagcgataagctgatgcggcgc
atctataaaggaattcccctgcaactgcgtggagaggtctggtgtctgctgctcgacatt
cccaagatcaaggaggagaagaaggacttctatgagaaactgaaacacagggcgcggggt
ttgtctccggacattcggcagattgacctggacgtcaaccgcacctacagagaccacatc
atgttcatgcaccgctacgacgtcaagcaacaagcactatttcatgtcctcacagcctac
tcgatttataacacggaggtgggctactgccaggggatgagtcagatcactgctctgctg
ctgatctatatgaatgaggaggatgccttctgggcactggtcaagctgctgtctggacag
aagcactccatgcacggattctttgtgcctggatttcccaagctcatgcgatttcaggaa
caccatgacagaatacttaagaagatgatgcctaaactgaaacagcacctggatacccaa
gaggtgcataccagtctctacaccatgaagtggttctttcagtgctttctggaccgaact
cctttcacactaaccctacggatctgggacatctacatcctggagggagaacgagtgcta
accgccatgtcctacacagtcctcaagcttcacaagaagcacctgctgaagctgcccatg
gaggacttggtggagttcctccaggtggcgctgtctaaagacttcttcttcgaggacgac
tttgtcatcgagcagctgcagaactctatgtccgagctgcgcagggctaaactcgagcta
cctcccccagctaaagaggaggagtttcccaagaagcctctggggcagcttcctcccgag
ccgctgaccaatcacgtggccaatggtcagacgccgggcggacaggccgtggtggacggg
ccgatgacggcggcgctgcgcgggcccagcctggccaatcagagcctgagcgtgccggcg
gaggcggggccaacccccagcccctcccccgatcgcccgaaggacggccgcccgccgagc
cggacgcggcgcgactccctggacaagctcctgcggctcgccaaggcggccagcggcggc
ggggaccgcagcggaggaggacgcaaccgcagctcgggcggcagcagcgacgtggagtcc
cgcaagcaccagtcctcgggcccctcgcctcccaacgccaccagcacgccggactggggc
ccccacaagccccaggggcagcagcagcagcagcaggcgacgcctccgcaccaccacgcg
tccgccaaccacaactccaacgcggggtccagcgcccgccacgagcggcccgagcggccc
tacaccccgcgctgggtcaagccctccgactccaagctggaggcggccaaggcggcggcc
atgcgcgagacccaccacagccgcgccgcctcgcccgcgcccgcgcccccgctcaccccg
accacccccaccgccgaccccgcggctctcggccagggcgcctcgggccgccggccgcgc
tctcacggcttcgcgccgggctccaaccgcgcgtccaacgcctcgcagtacgacaacgtg
ccggggcccgacgggctgcccgtcatggaggtgctggagctggagcacccgccctcgcgc
ccgcccctgcgccagagccccacgaggccccctagtggcggcttcagcagcagcgccccc
acgcggcagcccaagcccaacatggccgccgccgccgtccctctgcccatgcacgcgtcc
aactcccgcgtcggccttagcggcggcgtctcgtcggcgcaccagtccccgcaccacttc
taccccccgcccagcggagggcagcactcgccggcgcgcgtgcccatggcgccgctctac
accaccttcggcgtggacgcccgctcgcccgaggagcgtccggtctacgggctgagctac
ggcgagcgggcggggggctacgccaccacgcaacgccacccgcacggcggcggactctca
cccgagaaagtcctgatgaacaacatgtacgccacctaccgacgccagcccaacccctcc
acccaccacctccaacaacaacaacaacaacagcaacaacaacaacacccccacacacat
cgcccccccctctctgttgcccctctggacctcagcgcccatctggacactagtgtggtc
agtgcgggcagtggcgatggcggacattttggcgggcaatacctaccgcagcgccagcac
acagcgtaccagcccgtggagtaccgctacgatgcccggaggagggggggagacgagagc
gccgcgtacctgcccgaggtgaggggcggctggggagttcgggagggcgagatgcccccc
aagtcccccggaggactgccccggtcgcccagcttccagaaggcgcagatgtcccctatg
caggagttcatcttcccccctctgccgggcgaggacgcagtactgggaagcgtctacagg
gggggctaccaccaccagccccagaaccagcaccaagaacagctgccgccgggcgccggc
agacagccacagctcccccatctgttcggaggcgtacactacagccacgccgcgcaagag
gccttcgccatgcaggagtccatgttgctatga
DBGET
integrated database retrieval system
