Sardina pilchardus (sardine): 134062120
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Entry
134062120 CDS
T10667
Symbol
apex1
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
spil Sardina pilchardus (sardine)
Pathway
spil03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
134062120 (apex1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spil03400
]
134062120 (apex1)
Enzymes [BR:
spil01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
134062120 (apex1)
DNA repair and recombination proteins [BR:
spil03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
134062120 (apex1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
134062120
NCBI-ProteinID:
XP_062374005
LinkDB
All DBs
Position
17:14041312..14044970
Genome browser
AA seq
310 aa
AA seq
DB search
MSKRGKKAEVAVDGENEAAPPEAKKGKKGKEPEAPILYEDPPDKLTSKEGTAANMKITSW
NVDGLRAWVKKKGLDWVREESPDVICLQETKCAEKALPAEITSMPEFPHKYWAGSEEKEG
YSGVAMLCKTEPIDVTYGIGKLEHDKEGRVITAEFPDFFLVTAYVPNASRGLVRLDYRKT
WDVDFRAYLSDLDKRKPLVLCGDLNVAHQEIDLKNPKGNRKNAGFTQEERDGFTELLEAG
FVDSFRELYPEQGYAYTFWTYMMNSRSKNVGWRLDYFVLSKALLPKLCDSKIRNSAMGSD
HCPITLHLAL
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcgaggaaagaaagccgaagttgccgtcgatggagagaacgaagcagcaccc
cctgaggccaagaaggggaagaaagggaaagagcctgaggccccaattctgtatgaagac
cccccagacaaactgaccagtaaggagggaactgctgccaacatgaagatcacgtcctgg
aatgtggatggccttcgtgcatgggttaagaaaaagggtctggattgggtacgcgaggag
tccccagatgtgatttgcctgcaggagaccaaatgtgctgagaaggccttgcctgcggag
attacctccatgcccgagtttccccacaagtactgggcgggctcagaggagaaggagggc
tacagtggggtagccatgctctgcaaaacggagcccatcgatgttacttacggcattgga
aagttggaacatgataaggagggccgtgtcatcactgccgagtttcccgacttcttcttg
gtgacggcctacgtgcccaacgccagccgcggactggtgaggctcgactaccgcaagacc
tgggacgtggacttcagagcctacctcagcgacctggacaagcgcaagcctctggtgctg
tgcggggacctgaacgtggcgcaccaggagatcgacttgaagaaccccaagggtaaccgc
aaaaacgccggcttcacccaagaggagcgcgacggcttcaccgagctcctggaggccggc
ttcgtggacagcttccgcgagctgtaccccgagcagggctacgcctacaccttctggacc
tacatgatgaattcacgatccaaaaacgtcggctggcgactggactactttgttctgtcc
aaggccttactgcctaagctatgcgacagcaagatccgcaactctgctatgggtagtgat
cactgccccataaccctgcacttggctctgtaa
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