Sardina pilchardus (sardine): 134062125
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Entry
134062125 CDS
T10667
Symbol
tnpo3
Name
(RefSeq) LOW QUALITY PROTEIN: transportin-3
KO
K15436
transportin-3
Organism
spil Sardina pilchardus (sardine)
Pathway
spil03013
Nucleocytoplasmic transport
spil03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
134062125 (tnpo3)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
134062125 (tnpo3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spil03016
]
134062125 (tnpo3)
Transfer RNA biogenesis [BR:
spil03016
]
Eukaryotic type
tRNA transport factors
tRNA import factors
134062125 (tnpo3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_TNPO3_IPO13_4th
TPR_TNPO3_IPO13_3rd
TPR_TNPO3_IPO13_2nd
Xpo1
IBN_N
TOR1L1_N
Motif
Other DBs
NCBI-GeneID:
134062125
NCBI-ProteinID:
XP_062374009
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Position
17:2295763..2308508
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AA seq
922 aa
AA seq
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MDGTKPSVPIVYQAVQALYHDPDPAGKERASVWLEELQRSMYAWEVSDQLLQLKQDVESC
YFAAQTMKMKIQTSFYELPPETHLALRDSLLSHIQNLKDLSPIIITQLALAIADLALQMA
SWKGCVHTLIEKYSNDISSMPFLIEILTVLPEEVHSRSLRIGANRRTEIIEDLAFCSSTV
VALLVTCVEKTGNDEKMLIKVFRCLGSWFNLGVLDSNFMASNHLIIVLFQVLQRHDTSTN
LHEAASDCVCSALYAIENVDTHVALAMQLFKGVLTLETAYHMAVAREDLDKVLNYCRIFT
ELCETFMEITVRSPGQGMGDLRTLELLLICAGHPQYEVAEISFNFWYRLGEHLYKTNNPA
LHNVFRPYIQRLLHSLARHCQLDPDHEGIPEDTDDFGEFRMRVSDLVKDVIFLVGSMECF
SQLYSTLREGNPPWEVTEAVLFIMAAIAKSVDPENNPTLTEVLEQIVQLPQTVHMAVRYT
SIELVGEMSEVVDRNPRFLDPVLNYLMKGLREKPLASVAAKAIHNICSVCRDHMSQHFQG
LLEXRALDTFALSSDAAVGLLKGTALVLARLPLDKIAECLSDLCAVQVMALKKLLAHDSS
NGKTADPTVWLDRLAVIFRHTNPMVENGQTHPCQKVIQEIWPVLSETLNAHQADNRIVER
CCRCLRFAVRCVGKGSASLLQPLVTQMVSVYQVYPHSCFLYLGSILVDEYGMEEGCRQGL
LDMLQALCMPTFQLLEQPNGLRNHPDTVDDLFRLATRFVQRSPVTLLSSTIIVHIIQCAI
AAATLDHRDANCSVMKFVRDLVHTGVSNDHEDDFEVRKQLIGQAMGQHGQQLVTQLVHSC
CFCLPPYTLPDVAEVLWEIMVFDRPTFCRWLETALKGLPKDTAGGAVTVTHKQLTDFHKQ
VTSAEECKQVCWAIREFTRLYR
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atggatggtaccaaaccgtccgttccaattgtataccaagccgtacaggctctttaccac
gatccagaccctgccggtaaagagagagcctcagtatggctcgaggaactgcaaagatcg
atgtatgcatgggaagtgtcagatcagttgctgcagttgaagcaggacgtggagtcctgt
tactttgcggcccagactatgaagatgaagattcagacctcattctacgagcttcctcca
gagacccacctagccctgcgtgactccctgctctctcacatacagaacctcaaagatctt
tctcctattataataacccagcttgccctagcaatcgcagacctggctctgcagatggct
tcgtggaagggctgtgtccatacactcattgaaaagtacagtaacgacatctcctccatg
cccttcctgattgagatactcactgttctaccagaggaagtgcacagccgctccttaagg
attggtgcaaacagacgcactgaaatcattgaggatttagccttttgctccagtactgtt
gttgccttgttggtgacgtgtgtggagaagacgggcaacgatgaaaaaatgttgataaag
gtgttccgctgcctggggagctggtttaaccttggggtgttggacagcaacttcatggcc
agcaaccatctcatcatagtgctcttccaagttctgcaaaggcatgacacatccaccaat
ttgcacgaggctgcctctgactgtgtgtgttcggcactttatgctattgagaatgtggac
acacacgttgccttggctatgcagctgttcaagggtgtattgacgctggagactgcctac
cacatggctgtggccagagaagacctggacaaagtgctgaattactgccggatcttcacg
gagctatgcgagaccttcatggagatcacagtcaggagcccaggtcagggcatgggagac
ctgcgcacactggaattgcttcttatctgtgcaggccatccacaatatgaggtagcagag
atttcctttaacttttggtaccgtctgggagagcatctctacaagaccaacaaccctgcc
cttcacaatgtcttcaggccctacatccagagactgctgcatagcttggctcgccattgt
cagctggacccagatcatgaaggcatacccgaggacactgatgattttggggagttcagg
atgagagtttcagatcttgtgaaggatgtgatctttctagttggctccatggaatgtttt
tcacagctttactctacgctgagggaggggaacccaccatgggaggtgaccgaagctgtg
ctcttcatcatggccgccattgccaagagtgtagatcctgagaacaatcctaccctgacc
gaggtgctggagcagatcgtgcagttgccccagacagtgcacatggcagtgcgctacacc
agcatcgagctcgtgggagagatgagtgaagtggtggaccgcaaccctcgcttcttagat
cctgttctgaactacttgatgaagggtctgcgggaaaagcctctcgcttcagtggcagcc
aaagccatccacaacatctgctctgtgtgccgtgaccacatgtcccagcacttccagggc
ctgctggagncgcgtgcactcgacacctttgccctgtcctcagatgctgctgttggccta
cttaaaggtaccgccttagtattagcccgactccctctagacaagattgctgagtgtctg
agtgacctctgtgctgtacaagtcatggcgttgaagaagttgctggctcatgattctagc
aatggtaaaactgcagaccccactgtgtggctggacagactagcggtgatcttccgacac
accaacccgatggtagagaatggccagacacacccatgccaaaaggtcattcaggagatc
tggccagtgctgtccgagactctgaatgcacaccaggccgataaccgcatcgtggagcgc
tgctgccgctgcctgcgctttgctgtgcgctgcgtgggcaagggatccgcctccctgctg
cagcctctggtcacacagatggtgagtgtgtatcaggtgtacccccactcgtgtttcctc
tacctgggcagcatcctggtggatgagtatggcatggaggagggctgcagacaaggcctt
ctagatatgctgcaggctctgtgtatgcctacctttcagctcctggagcagccaaacggg
ctgcgtaaccaccctgataccgtggatgacctcttcagacttgccacaaggtttgtccag
cgcagtccagtcactctcctcagcagcaccatcatcgtccacatcatccagtgtgccatc
gcggccgccacccttgaccacagagatgccaactgcagcgtcatgaagtttgttcgtgac
ctggtccacactggcgtctccaatgatcatgaggacgactttgaggtgcggaaacagctg
ataggtcaggctatggggcaacacggccagcagctggtcactcagctggtgcactcctgt
tgcttctgcctgccaccatacacactccccgacgtggcagaagtgctctgggagatcatg
gtctttgaccggccgaccttctgccgctggctggagactgcattgaagggtcttcccaag
gacacggccgggggagccgtcactgtcactcacaagcaactcacagacttccacaagcag
gtcaccagtgcagaggaatgtaagcaggtgtgctgggcgatccgagagttcaccaggctc
taccgatag
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