Sardina pilchardus (sardine): 134062131
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Entry
134062131 CDS
T10667
Symbol
trim24
Name
(RefSeq) transcription intermediary factor 1-alpha isoform X1
KO
K08881
tripartite motif-containing protein 24 [EC:
2.3.2.27
]
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
spil01001
]
134062131 (trim24)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spil04121
]
134062131 (trim24)
Enzymes [BR:
spil01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134062131 (trim24)
Protein kinases [BR:
spil01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
134062131 (trim24)
Ubiquitin system [BR:
spil04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
134062131 (trim24)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_UBOX
PML_CC
PHD-1st_NSD
zf-C3HC4
zf-RING_5
zf-RING_2
DUF5054
PRANC
Exonuc_VII_L
ParB
Motif
Other DBs
NCBI-GeneID:
134062131
NCBI-ProteinID:
XP_062374022
LinkDB
All DBs
Position
17:complement(2516383..2525233)
Genome browser
AA seq
1158 aa
AA seq
DB search
MDESTEKVEPDDIVIIVENEAESMPVQEESEKAQSTHSLMDCCPICKLNFHSREPKLLPC
LHSFCKKCLPPPSRNFLYPSQMMANHQLHVEDPSKPLNVIRCPVCHQECMEVEVLENFFV
KDSMEVPSSTVEKTSQLCMSCEDNTEATGYCVECVEFLCVTCIEAHQRVKFTRDHTIRQK
EEMSPEGVAVSTQKPVFCDIHKQEPLKLFCETCDRLTCRDCQLLKHKDHNYQFLEDAYRN
HREHLENMTRQLQEKRKAIEDVSNAINNGLHQVDENRKAVTTEIKKSICNLIMEINRKGK
ILINQLEALTKDHEGALKKQQEDVSSLSKHLDHVISFTKWATAINSGTALLYCKRLILCQ
IQYLMRAKCSASSYVPQNSVRFQCRSSFWASNVDLGSLVMEKVPGHQPSGMQMFPNQPNH
PNHPNHPNHPNHPNHPNHPNHPGPRPEGPSGPFPGGNAQQRQSTLAQLQMQVEKLAQHPN
RHPPPNHWSWYHNMRLPGPHPPRPMQGGSPSQTHPNMPQQSRRYSAPQPNTRSPTAMMQN
TAFAPQTLRGMINSPSSSNFPPKPMDVLQGAARYSQNAPSSGGGHLTNPQPSLHQRNVMD
PIHLNRRPEPPGPLQLNIPRHHLLHTVPTTIADRNAQSQQSSPMLTANSTDGKTGTVSWK
RTDPQPSGPSTSSAKRRRRSSPGPIIVIKDEPEDDDEVRFVQSSVKASLPDSTGVQSQTP
RQESPPGEEQQTEKPPEPDQDPTEDPTEDPTEDPNDDANDDANDDPNEDWCAVCQNGGEL
LCCDKCPKVFHLSCHIPGLQSSPSGEWFCSFCRDLATPEMEYDTIDSTKAVKKEPDSEGL
SPIDKRKCERLLLRLYCNELSTDFQDPVSPSTMPEYNEIIKSPMDLSVARSKLELKQSPF
YKRPDDFVADIRLIFKNCAKFHKEDNEMASVGVNLENFFEEQLKLLYPEQTFPEVKEEGS
ASSAPEDHVPSDVPCEEHGAPVEPDAAESPSPKSPSLPSPPSDEVSDPTTEARPDKPGQD
DPGQDDPGQDDPGQEDAGQDEACKDGPGQEEACEGGPSQDGPSQDEACEGGPSQNEPSQD
EACEGGPSQNEPVQEEPGQDEPGQDEPGQDEHGQDQPSQDEPGQNEHGQDQPSQDEPQES
DAQEDSPKEDEKMDETEG
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atggatgagagtacagaaaaagtcgagcctgatgatattgttattatcgttgaaaatgaa
gccgaaagtatgccggttcaagaggaaagtgaaaaggctcaaagtacccacagtttaatg
gactgttgtcccatctgcaagttgaatttccatagcagagagcccaagcttctaccctgt
ctccactctttctgtaagaaatgcttgccacctccgtcaaggaattttttgtatccaagc
caaatgatggccaaccatcaacttcatgtggaagatccatcaaaaccgctcaacgtgatt
cgttgtccagtttgtcatcaggaatgtatggaagtggaagttttagagaacttctttgtt
aaagactcaatggaagtgccaagcagcacagttgagaagacaagccagttgtgtatgagt
tgtgaggacaacacagaggccactggctattgtgtggaatgtgtggagtttctctgcgtt
acttgcattgaagctcatcagcgggtgaagtttacccgtgaccacaccattcgacagaaa
gaagaaatgtcaccagaaggagttgcagtctccacccagaagcctgttttctgtgatatc
cacaaacaggagcctttgaaacttttctgtgagacttgtgatcgtctgacctgtcgggac
tgtcagttgctcaagcacaaggatcacaattaccagtttctagaagatgcctacagaaat
cacagggaacatttggagaatatgactcgacagctccaggaaaaaagaaaggctatcgaa
gatgtctctaatgcaatcaataatggtctccatcaggttgatgagaaccgtaaggctgtc
accactgagatcaagaagtccatttgcaatctcattatggagattaacagaaaagggaaa
atattgataaatcaacttgaggctctcaccaaggatcatgagggtgcactcaagaaacag
caggaggatgtctcttccctctccaaacacctggatcatgtgatctccttcaccaagtgg
gccacagccatcaacagtggcactgctctcctttactgcaaaagactgattctttgtcag
atacaatacctcatgcgggcgaagtgcagtgcctcctcatatgtcccccagaactcagta
cggttccagtgtcgctcaagcttctgggcctcaaacgttgatcttggctctctggtcatg
gagaaagttccaggacaccaaccaagtgggatgcagatgttccccaaccaacccaaccat
cccaaccatcccaaccatcccaaccatcccaaccatcctaatcatcctaaccatcccaac
catcctggaccaagacctgaaggaccctctgggccctttcccggggggaatgcgcaacag
cggcagagcacactagcacagctccagatgcaggtggagaagctggcccagcatcccaac
cgccacccaccaccaaaccactggtcctggtatcacaacatgcgcctcccaggcccacac
ccacccaggcccatgcaggggggatctccttcccaaacccatcccaacatgcctcagcag
agccggcgatacagtgctcctcaaccaaacacccgcagcccgacagccatgatgcaaaac
acagcctttgcccctcagactttaagaggaatgattaactcacccagctcctccaatttc
ccacccaaacccatggatgtgcttcagggtgcagcgcgatattcccaaaatgcaccttcc
tctggaggtggacaccttaccaaccctcaaccctctctgcatcagagaaatgtaatggac
cctatacacctaaacagaagacctgaacctcctgggcccttgcaattaaacattcccaga
catcatctcctccatactgtccctaccaccattgctgatagaaatgcacaaagtcagcag
agctcccccatgttaacagcaaactccactgatggaaagacagggactgtttcttggaaa
cgaaccgacccccaaccaagtggaccgtccacctcctctgctaagagaagacgaaggtca
tcccctgggcccatcattgtcatcaaagatgagccagaagatgatgatgaagttcgcttt
gtccagtccagtgtaaaagccagtctgccagacagcactggtgtccagtcccagacccct
cgtcaggagtctcccccaggtgaagagcagcagaccgagaagcccccggagcctgaccag
gatcccaccgaggatcccaccgaggatcccaccgaggatcccaacgacgatgccaacgat
gatgccaacgacgatcccaacgaggactggtgtgctgtgtgtcagaatggaggggaactg
ctctgctgtgacaagtgtcctaaagtcttccatctcagctgccatattcctggcctccag
tcttctcctagtggggagtggttttgttcgttttgccgagacctagccacacctgaaatg
gaatatgatacgatagatagtactaaagcagtgaaaaaggagccagattccgagggacta
tctcctatagataaaaggaagtgtgagagattattacttcgtctatattgcaatgagctc
agcactgatttccaggacccagtctcaccatcgacgatgcctgagtataatgagattata
aagtctcccatggacctctctgtggcgaggagcaagctggagttaaagcagagcccattt
tacaagaggcctgatgactttgtcgccgacattagactgatctttaaaaactgtgccaag
tttcacaaggaggacaatgagatggccagtgtaggtgtcaacctggagaacttctttgag
gagcagctgaaactcctttatcctgagcagacttttcctgaggtgaaggaagaaggttct
gcctcttcagctccagaggaccatgtgccctcagatgtgccctgtgaggaacatggggct
ccagttgaacctgacgctgctgagagtccatctcccaagagtccatcactccctagcccc
cccagtgatgaagtctccgatcctaccactgaagcccgtccggataaacccggtcaggat
gatccgggtcaggatgatccgggtcaggatgatccgggtcaggaggacgctggtcaagat
gaggcctgtaaagatggtcccggtcaagaagaggcctgtgaaggtgggcccagtcaagat
gggcccagtcaagatgaggcctgtgaaggtgggcccagtcaaaatgagcccagtcaagat
gaggcctgtgaaggtgggcccagtcaaaatgagcccgttcaagaagagcctggtcaggat
gagccaggtcaggatgagcctggtcaggatgaacatggccaagatcagcccagtcaggat
gagcctggtcagaatgaacatggccaagatcagcccagtcaagatgagccccaggagtct
gatgcccaggaagactctcccaaggaggatgaaaagatggatgaaacagagggatga
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integrated database retrieval system
