Sardina pilchardus (sardine): 134062175
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Entry
134062175 CDS
T10667
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2-like isoform X1
KO
K05046
solute carrier family 6 (neurotransmitter transporter, GABA) member 13
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
134062175
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spil02000
]
134062175
Transporters [BR:
spil02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
134062175
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Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
134062175
NCBI-ProteinID:
XP_062374080
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Position
17:16633676..16669006
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AA seq
608 aa
AA seq
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MAVDQGVVLKKDGMPEKPLDERKSLDKTSLLERGQWGSKAEFLLAVAGQIIGLGNVWRFP
YLCYKNGGGVFFVPYLLFLVLCGVPLFLLETSLGQFTCLGGVSAWRSICPLFGGLGYASQ
IMILHGCVYYIVILAWAFFYLCSSFQTVLPWSHCNNTWNTAACVEFDRRNITGNGSLVEN
ATSPVMEFWEEEVLKLSPGPDQLGSVNWRLALCLLMVWVVCYFCVWKGVKSTGKVVYLTA
TFPYVMLFILLARGVTLPGASTGIIYYLKPNHTRLADPQVWMDAGTQIFFSYGICLGSLT
ALGSYNRYNNDCYKDCFLLCLLNSATSFLAGFAIFSVLGFMAEEQGVRMDQVAQSGPGLA
FIAFPRAVAMMPVPQLWAVCFFLMIIMLGLDTQFVSLEALMTSVSDLYPTLVRRGYRREL
LLLVICIICFLVGLVMVTPGGLYVFQIYDHFSCSGASLLLLSIFQSVAVGWVYGPDRFCE
NIKSMIGYSPSPVFRLCWKYFTPTVCIATFVFSLVRWAPLDLGKGVAAPTWASGLGWLLT
LSSVSMLPLWALYALINTPGSLRQRLCLLCQPAADSPLAHKHLGNGCNMTLDPSQYPTSE
KLLMSGVI
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggatcaaggtgttgtactcaagaaagatggcatgccggaaaagcctttggat
gagcgaaaaagcttggacaagacgtccctgctggagcggggccagtggggcagtaaggcc
gagtttctgctggccgtagcagggcagatcattggcctgggcaacgtttggcgcttccct
tatctctgctacaagaatggagggggagtgttttttgtgccgtacctgttgttcctggta
ctgtgtggggttccattgttcctgctagagacatcactgggtcagttcacctgtctgggc
ggagtcagtgcttggaggagcatatgccctctctttggaggtctcggttatgccagtcag
atcatgatcctgcatggttgcgtttactacatcgtcatcttggcctgggcgttcttctac
ctgtgctccagctttcagaccgtgctgccctggtcccactgcaacaacacctggaacaca
gcggcatgtgtggaatttgatagacggaacatcacaggcaatggaagcttggtggaaaat
gccacatctccagtcatggagttctgggaggaagaggtgctgaagctctcccccggccct
gatcagctgggttcagttaactggcgtctggctctctgtctgctgatggtctgggttgtc
tgctacttctgtgtgtggaaaggtgtcaaatccacaggcaaggtggtgtatctgaccgct
acgttcccgtatgtgatgctgtttatcctgctggcccgtggggtcactctccccggggcc
tcgactggaatcatctactacctcaagcccaatcacacgcggcttgctgacccccaggtc
tggatggatgctggaactcagatattcttttcgtatggcatctgcctgggcagcctcact
gcgctgggtagttacaacagatacaacaatgactgctacaaagattgcttcctgctgtgc
ctgctgaacagcgccaccagcttcctggccggcttcgccatcttctccgtgctgggcttc
atggcagaggagcagggcgtccgcatggaccaggtggcccagtcaggaccgggactggca
tttatagcatttccgcgggcagtcgctatgatgccagtacctcagctgtgggctgtctgc
ttcttcctgatgatcatcatgctgggactggacacacagtttgtgagtctggaggcgctg
atgacgtcggtgtcggacctgtaccccacgctggtgcgtcggggttaccggcgtgagctg
ctgctgctggtcatctgcatcatctgcttcctggtcggcttggtgatggtcacgccggga
gggctgtatgtttttcagatctacgatcacttctcctgcagtggagccagcctgctgtta
ctgtccatcttccagtctgtggccgtgggatgggtctacggcccagaccgcttctgcgag
aacatcaagagcatgatcggttactccccctcccccgtcttccggctgtgctggaagtac
ttcacccccaccgtctgcattgcgacgtttgtgttctctctggtgcgctgggcgccgctg
gatctgggcaaaggcgtggcggcccccacgtgggcctcaggactgggctggctcctcacg
ctgtcctccgtctccatgctgccactctgggcactctacgctcttatcaacacaccaggc
agcttaagacagcgcctgtgccttctatgtcagccggctgccgactcccccctggcccac
aagcacctcggcaacggctgcaacatgacccttgaccccagccagtacccgacctccgag
aagctcctcatgagcggagtcatctag
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