Sardina pilchardus (sardine): 134062202
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Entry
134062202 CDS
T10667
Symbol
utp20
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spil03009
]
134062202 (utp20)
Ribosome biogenesis [BR:
spil03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
134062202 (utp20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
CEP104-like_TOG
Mpp10
Motif
Other DBs
NCBI-GeneID:
134062202
NCBI-ProteinID:
XP_062374128
LinkDB
All DBs
Position
17:27600665..27648427
Genome browser
AA seq
2875 aa
AA seq
DB search
MKLKIKPTSHKSDNTYRFLTFSERLANVNIDVIHRIDRTRSYDEEVETYFYEALNKWRDL
NLTEHFTVFLKEVSNKSQSFNLLVFHQKAIVDSLKNHLSVKGSMAFQPLLDLVVQLARDL
QTDFYPHFPEFFVIITAILETQDTEVLEWVFTCLSYLYKYLWRLMVKDMDQIYSMYSKLL
AHKKEHIRNFAAESFSFLMRKVPDFDALFTLMFVDLGEQSHKAAGVGQLIFAMCRGVRSM
FHSCAAVALPAALRKLGPSVEEGGVALPWDAVKEALDHMAEAAANHVEKEHFLVLWDALE
GCVKEVVPRLQGSGGDEASQQLERLLFLYHTLVQHRKGAKITQPAAVCETLLLLVQTSGQ
SYVCSQRTLQVLACLLLGECVPALTPQLIQDAVRKVFRSGVDRDLILTFSRELFKMKQFE
QLVLPGLLQYLEVQFGSGDAVARLQAQELLVRLILEKAPPPSDGSMAFEKYPLVFTGQTQ
GGPAGAEGAEGKVNVPQYVLSLVDLPPDLPLTDLSLPWAALVLLHHIRPVEPESVVPILT
TLLNRLLTDVQNGALGRAGLFVARQALSTLLSFRDSAEVLSLLPVELVTSIIKKYSADLS
ALLLGDLYYTRLSLNGCSAHLSHDALLELYQILKSNFSSNVSKIRLLSLRILSHFEAEFP
KPAEAEESRERQSVFAICLQAEQVPATVQDYREKLLHLRKLRHDLVQPCLPSGPFHQVPL
RYLIAMLFVNFRPLWDAVIELLVSHAQGMDNKEFWRVFHEHLDMVAQLAEDELHEDEEED
AEGAVDGDEGDEGDDADADAEEEEEEEEEAEEGMEVGDDKEGPEEEEEEEEEEEESDAGR
DVSASGDVGVLFLEQLDDAEEGTDERTDFTNFRNLLWRAMSLFPDRVEPRSRELTPLLLR
FIREEFFPSDLLVAPTQNLLKAVEGATKDEEGKEEEEEEEEGPKGRRKGPRRAAAKQLIA
HLKVFSKFTNPRALYLEPKLRELYAKLLCHKDQNIQKMALECVLTYKDPAILPYKENLER
LLDDKHFKDEIVHFNISEEGTVVQDDHRPQLIPLLMRILYGRMSTKGGSKFQGKAVTASR
SAIVLRFLAGCQPHELGVFIDMLLEPVAHYSQGGCAEAVECVLQGCDPGAVLPVGRQHSV
LNVVAVLLDKLGHLLDTHLPKLLQILLCMTASVSRVLDHREQLKPGCIAPLKNLRRLGLL
RVQDFFSSFDSFNFTADQIDAIFNAVVWPQVCRLPSESPYAPTPLLKLIHIWSKNARFFP
LLAKQRPGHPECGVLLNVFALLSVKNVSLATTAMVMDIAESLLTTEDFVAMETENEAEKE
EELCVNDCVVPELGGASDGSEDSVSLGSKLLYPHVPAVLQYLSKMVRNSDHLRKKKFRSQ
VGKELNILSKISRFVRDKEQSATLITLLLPYLTKPKTAQETELDILETVQNLLKQCSNPA
EFLKPMSRLLSTLQSKISRQALCAVFQTLAELDGELKYITDMAVQLNAFDSRHLDEVYFD
VRLTAFQEATGRVKDMTAELDMRYLHTLMHNCFHSFEIGDMSLADTAILCLSTVIEQLAA
LGTPEKEFREIVQHNIMDAIRKGLRSKMESVRNDYTTVLACLVKTFPERPEFRDLVQLTN
YSDPESDFFEHMKHIQVHRRGRALRRIAKQLTEGSVVMSSRSMQNYIMPYAMTALFDEKM
KRNDNMSSAGVEVVGAVCGRLTWSKYLYYLKHFVHVLQMGLAEQKLAVNLLLTVLDAFHF
DRETLSKEIEAAKLRKEAAATEIEDDEEEAEEGDSEDSDAEDAVETVSAEGDAVAMETED
TATTPDVQEKEAGSKKKATPTVCTGLPQSVQDLEKLIDTVHHSVTQSILPRLHKCLTAKV
QRDDEHKTVQSKEVKEEEVARVPIAFAMVRLMLSLPQDVMEANLPGVLLKVCVHLRSRFQ
EIRDVARSTLIKIIQTLGSRYLLYLLKEMQGVLMKGYQVHVLTFTVFHLLSAVKPTLKGG
DLDPCLDLLVQMFNNELFGPVAEEKEVKGIGSKLMEARHSKSADSYELLGQFCSQDKVTQ
VILPLKEILETTMSLRVSRRVHMVLRRVVAGLLQNDVMTPQAVLMLSHGLVNESLPLITQ
KNKRKPLPPPDPRLAPPSCLLMPATPKRGFQKAAVSSKTNTHILVETGLSLLHLSMKSSK
VNSSVSDVREMLDPFVALLLDCLGSKHVKVITEALQAFIWVLKFPLPAVEEGAELLTRQL
FLLLKDYASAGAAGGENAHLVQNCFKAITILVKSVTKHKITDTQLQVLLGYAEEDIYDHT
RQATAFGLLKAILSRRLVVPEMEDVMKKVAKLAVTGASDQVRVPCRQIYLKYLMDYPLGK
KLQKHLDFVVAQLSYEYDTGRQSALEMMAYIFQSFPQNLLLEHCGLFFVPLSLAVVNDDS
ARCKKMTALAIKSLLSQLDPEHQNNMFSLVNTWMTGDKMSLRRLGVQVCGLFVEVEGERF
TKRMEVLLPLIEKDIHTDNYEDIEEEQDEKAADRLLFCHLTLITKLIKDCGFLQLTKPMD
TLTSIWAHVNAHLRHPHSWVWLTAAQLFGQLFAAHQPEQLLELWGDDSTDTSTGTGPGPA
TPVATTHLYSNLDKKMRELVLSFCHQLQSKFLEPTAGDQVVKNLLFVAKVIYLISPESEV
TETDKTGENGVTQMEEGEKEEDMKEEKEEKAEEEEKREEEKAAEEEEGEQEEEEEQDDDD
DDDRPPSLLWVMKKLCVLAKREAAYTPKVPLKRTCVFKFLGAVAVDLGKDRLGPYLTTII
APLHRELDSTYADQDPTLKNLAQELMELLKRLVGLQRFSLAFAAVQKEASRRRAARKRHR
AMQAVANPDIAARRKIKKHTKMEAKKRKMEFSRKPTKAKKLKLKGKSVRDLAILQ
NT seq
8628 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgaaaattaaaccgacgtcgcacaaatcagacaacacgtacaggtttctcact
ttctccgagagacttgccaacgtgaatattgatgtcatccatcggattgaccgaacacgg
agctatgacgaggaagtagagacgtacttttacgaagcattgaacaaatggagggatcta
aacttaaccgagcacttcaccgtcttcctgaaggaggtgtcgaacaagagccagtcgttc
aacctgctggtgttccatcagaaggccatcgtggacagtctaaagaaccacctcagtgtg
aagggcagcatggcgtttcaacccctgctggatctggtggtccagctggctcgggatctg
cagacggacttctatcctcacttcccggaattcttcgtcatcatcacggccatcttggaa
acgcaggacacggaggtgctggagtgggtcttcacctgcctgtcctacctctacaagtac
ctgtggaggctcatggtcaaagacatggaccagatctacagcatgtacagtaagctgcta
gctcacaagaaagagcacatccgcaactttgcagccgagagcttctctttcctcatgagg
aaggtccctgatttcgatgcgttgttcacgctcatgtttgtggaccttggcgagcaatcc
cataaggccgctggggtgggccagctcatctttgccatgtgcaggggggtgcgcagcatg
ttccactcctgcgctgctgtggctctccctgcagctctgcggaagctcggtccctccgta
gaggaagggggcgtggctctgccctgggacgctgtgaaggaggccctggatcacatggcc
gaggcggcagccaatcacgtggagaaagagcacttcctggtgctctgggacgctctggag
ggctgtgtgaaggaggtggttccgcggctgcagggttctggtggtgacgaggccagtcag
cagctggagcgactgctcttcctctaccacaccctcgtgcagcaccgcaaaggggccaag
atcacccagccagccgccgtgtgcgagactcttctcctgctggtccagaccagtggtcag
tcgtacgtgtgcagccagaggactctgcaggtgctggcctgcctgctactgggggagtgt
gtgccggccctcacaccacagctcatacaggacgccgtcagaaaggtgttccgcagtggg
gtggaccgtgacctcatcttgaccttctccagagagctcttcaagatgaaacagtttgag
cagctggtgttgccagggctgctgcagtacctggaggtccagtttggttccggtgacgcg
gttgctaggctacaggcccaggagctgctggtgcgcctcatcctggagaaggctccgccc
ccctccgacggatccatggccttcgagaagtacccgctggtcttcaccggacagacgcag
ggtggccctgcgggggcagaaggggcagaagggaaggtgaacgtgccccagtacgtcctg
tccctggtggatctgcccccagacctgcccctcactgacctctctctgccctgggccgcc
ctcgtgctcctgcaccacatacggccggtagaaccggagtctgtggtcccgatcctgacc
acccttctgaaccgcctcctgaccgacgtgcagaacggggcactggggagagctggtctg
tttgtggcgcgtcaggctctgagcactctgctcagcttcagggactctgctgaagtcctc
tctctgctccctgtggagttagtcaccagcattataaagaagtactccgcagatctctct
gccttgttgctcggcgacctctactacaccagactgtcactcaacggctgctctgcccac
ctctcccatgatgcactgctggagttgtaccagatcctcaagtccaatttctcctccaac
gtctccaagatccgtctcctgtctctgaggatcctgagccacttcgaggccgagtttccg
aagcctgctgaggctgaggagtcgagggagaggcagtcggtgtttgccatctgcctgcag
gcggagcaggtcccggccacagtgcaggactacagggagaagctgctccacctcaggaag
ctacgccacgacctcgtgcagccatgcctgcccagcggaccattccaccaggtgcctctg
cgctacctgatcgccatgctgtttgtgaacttcagacctctatgggacgccgtcattgag
ctgcttgtgtctcatgcccaggggatggacaataaggagttctggagggtgttccatgag
cacctggacatggtagcccagctggcagaggacgaactccatgaggatgaggaagaggat
gctgaaggtgctgtagatggagatgaaggtgatgaaggagacgatgctgatgctgatgct
gaggaggaggaggaggaagaggaggaggcggaagaaggcatggaggtgggggacgacaag
gaagggccagaagaggaggaggaggaagaggaggaagaggaagagtcggatgctgggcga
gacgtgtcggcgagcggcgacgtgggcgttctcttcctggagcagctggacgatgcggag
gaggggaccgacgagcgcacggacttcaccaacttccggaaccttctgtggcgcgccatg
agcttgttccccgaccgtgtagaacccaggagcagagaactcacccccttactgctgcgc
ttcatcagggaggagttcttcccctctgacctgctggtggctccgacgcagaacctcctg
aaggcagtagagggcgccactaaggacgaggaggggaaggaggaagaggaggaggaggag
gagggccccaagggcaggaggaagggaccccgacgcgccgccgccaagcagctgatagcc
catctgaaggtgttctccaagttcaccaatccacgtgctctttacctggagcccaagctc
agagaactctacgcaaagctcctgtgccataaggaccagaacatccagaagatggccttg
gagtgtgtgctcacctataaagaccccgccatcctgccatacaaggagaatctggagagg
ctgctggatgataaacactttaaggatgagatcgtccacttcaacatctctgaggaggga
acagtggtccaagatgaccacagaccacagctcataccactgcttatgaggatcctgtat
ggtcgtatgtccactaaggggggcagtaagttccagggcaaggcggtcactgcgtcgcgc
tcggccatcgtgctgcgcttcctggccgggtgccaaccgcacgagctcggggtcttcata
gacatgctgctggagcctgtggctcactacagccaaggagggtgtgcggaggcggtggag
tgtgtgctgcaggggtgtgacccgggagcggttctgccggtgggtcgtcagcacagcgtg
ctgaatgtggtggcggttctgctggacaagctggggcacctgctggacactcacctgccc
aagctgctccagatcctgctgtgcatgaccgcctccgtctcacgcgtgctggaccacagg
gaacagctgaagccaggctgcattgcccctctgaagaacctgaggcgtctggggctgctg
cgggtgcaagacttcttcagcagcttcgactccttcaacttcaccgcagaccagatcgat
gccatcttcaacgctgtcgtctggcctcaggtgtgtcgcctgccttcagagagcccctat
gcccccacgcctctgctcaaactcatccacatctggagcaagaacgccaggttcttccct
ctgttggccaagcagaggcctggacacccggagtgtggcgtgctcctcaatgtgttcgct
ctgctgtccgtcaaaaacgtttccctggcaaccaccgccatggtaatggacatcgccgag
agcctgctcaccaccgaggactttgtcgccatggagacggagaatgaggcggagaaggag
gaggagctatgtgtgaatgactgcgtggtcccggagctgggaggggcttctgacggctca
gaagactctgtgagtttgggttctaagctcctctaccctcatgttcctgcggttcttcag
tacctgagtaagatggtccggaactccgaccacctccgcaagaagaagttccgttctcaa
gttggcaaggaactcaacattctctccaagatcagccgatttgttagggataaggagcag
agtgccaccctcatcaccttgttgctgccttacctgaccaaaccaaagactgcccaggag
acggaactggatatcctggagacggtgcagaaccttctgaagcagtgttctaaccccgca
gagttcctcaagcccatgagccgcctgctctccactctacagagcaaaatctcacgccag
gccctgtgtgctgtgttccagacactggcagagctggatggggaactcaaatacatcaca
gacatggctgtgcagttgaatgcgtttgatagtcgtcacctggatgaggtgtactttgac
gtgcgtctgacagcgttccaggaggccaccgggcgtgtgaaggacatgaccgccgagctg
gacatgagatacctgcacacactcatgcacaactgcttccactcctttgagataggggac
atgtctctggcggacacggccatcttgtgtctgtcgacggtcatcgagcagctggccgcg
ttgggcactccggagaaggagttcagagagatcgtccagcacaacatcatggacgccata
cgcaaggggctcaggagcaagatggagagcgtgaggaacgactacacgacggtgctggcc
tgcctggtgaagacgtttcctgagcgtccagagttccgggacctcgtccagctcaccaac
tacagtgacccggagtcagacttctttgagcacatgaagcacattcaggtccacaggagg
gggcgtgccctcagacggatcgccaaacagctgacggagggcagcgtggtgatgtcatcg
cgctccatgcagaactacatcatgccctacgccatgaccgccctgttcgacgagaagatg
aagaggaatgacaacatgagctcggcaggtgtggaggtggtgggggcggtgtgtgggcgt
ctcacctggtctaagtacctgtactacctcaaacacttcgtccacgtgctgcagatgggg
ttggccgaacagaagctggcagtgaatctgctgctgacggttctagatgcgttccacttc
gaccgtgagaccctcagcaaagagatcgaagccgccaaactcaggaaggaggccgctgcc
acggagatagaggatgacgaagaggaggctgaggaaggagactcggaggacagcgatgct
gaggacgccgtggaaaccgtctccgcagagggggatgctgtcgccatggagacggaggac
acagccactacacctgacgtccaggagaaggaggcggggtctaagaagaaggccacgccc
acagtgtgcacgggcctaccgcagagcgtccaggacctggagaagctgattgacaccgtc
catcactccgtaacccagagcatcctgccccgcctacacaagtgcctcaccgccaaggtc
cagagagatgacgagcacaagacggtccagtctaaggaggtgaaggaggaggaggtggcc
agagtgcccattgccttcgccatggtccgactcatgctgtccctccctcaggacgtgatg
gaggccaacctgcccggggtgctgctgaaggtgtgtgtgcacctgaggagtcgtttccag
gagatccgagacgtggcgcggagcacactcatcaagatcatccagacgctcggctcacgc
tacctgctctacctgctcaaggagatgcaaggcgtcctcatgaaggggtaccaggtgcac
gtgttgaccttcacggtgttccacctgctgtctgctgtgaagcccacgctgaagggagga
gacctggacccctgcctggacctgctggtgcagatgttcaataacgagctgtttgggccg
gttgccgaggagaaggaggtgaagggcatcggctccaagctgatggaggcgcgtcacagc
aagagcgccgactcctacgagctcctcggacagttctgcagccaggacaaggtcacgcag
gtcatcctgccgcttaaagagatcctggagaccacgatgagtctgcgggtgtcccggagg
gtccacatggtgctgaggagagtggttgccgggttactgcagaatgatgtcatgacccct
caggccgtcctgatgctgagtcacggactggtcaacgagagtctgcccctcatcacgcag
aagaacaaacggaagcccctcccacccccggacccccgcctggccccgcccagctgcctg
ctgatgcccgcgacgcccaagagaggcttccagaaggccgccgtcagcagcaagaccaac
acacacatcctggtggagacagggctcagtctgctgcacctcagcatgaagagctccaag
gtgaactcgtctgtgtcggacgtcagggagatgctggatccctttgtagcactgctgctg
gactgcctcggctccaaacacgtcaaggtgatcacggaggcgctgcaggcatttatctgg
gtgctgaagttcccgttgccagcggtggaggaaggggcggagctactgacacgacagctc
ttcctgctgctcaaggactacgccagcgcaggtgccgccgggggagagaacgcacacctg
gtgcagaactgctttaaggccatcactatcctagtgaagagcgtcaccaagcacaagatc
actgacacgcagctgcaagtgctgctgggatacgcagaggaggacatctatgatcacaca
cgacaggccacagcgttcggcctgctgaaggccatcttgtccaggaggctggtggtgccg
gagatggaggacgtgatgaagaaggtggccaagctggccgtcaccggggcgagcgaccag
gtccgagtgccctgcagacagatttacctgaagtacctcatggactatcctttggggaag
aaactccagaagcacttagacttcgtcgtcgctcagctcagctatgagtacgacacgggc
agacagtccgccctggagatgatggcttacatattccagagcttcccacagaacctgctg
ctggagcactgtggcctgttcttcgtgccgttgtcactggcggtggtaaacgacgactcg
gcgcgctgcaagaagatgaccgctctggccattaagtccctcctcagccagctggaccca
gagcaccagaacaacatgttcagcctggtcaacacctggatgaccggagacaagatgtct
ctgaggcgtctgggcgtgcaggtgtgtggtctgtttgtggaggttgagggagagcgtttc
accaagaggatggaagtcctgctgccccttattgagaaggacatccacacagacaactac
gaagacattgaagaggagcaggacgagaaggctgctgaccggctgctgttctgccatctc
accctcatcaccaaactcatcaaagactgcggattcttacagctcaccaagcccatggat
acactcaccagcatctgggctcatgtgaacgcccacctgcggcaccctcactcgtgggtg
tggctgacggcggcgcagctgtttggtcagctgtttgctgcccaccagccagagcagctg
ctggagctgtggggggacgacagcaccgacaccagcaccggtaccggcccaggcccggct
acacctgtagccaccacacacctctacagcaacctggacaagaagatgagggagctggtc
ttgtccttctgccaccagctgcagtccaagttcctggagccgaccgctggtgaccaggtg
gtgaagaacctgctctttgttgccaaggtgatatacctgatctcacctgagtctgaagtc
acggaaaccgacaagactggtgagaatggagtgacacagatggaggaaggagaaaaagag
gaagacatgaaggaagagaaggaggagaaggcagaggaggaagagaagagagaggaggag
aaggcagcggaggaagaggagggagaacaagaggaggaggaagagcaggatgatgatgat
gatgatgatcggcctccttcgttactgtgggtgatgaagaagctgtgtgtgttggccaag
agagaggcagcgtacacacccaaggttcctctcaagaggacgtgtgtgtttaagttcctg
ggcgccgtggcggtggacttggggaaggatcgcctcggcccgtacctgaccaccatcatc
gccccgctgcacagggaactggacagcacctacgcagaccaggacccgacgctgaagaac
ctggcgcaggagctgatggagctgctgaagaggctggtggggctgcagcgcttctccctc
gccttcgccgcagttcagaaggaggccagcaggaggagagcggcgcgcaagaggcaccgc
gccatgcaggccgtggcgaaccccgacatcgctgcccggaggaagatcaagaagcacacc
aagatggaggccaagaagaggaagatggagttctccaggaagcccaccaaggccaagaag
ctcaagctgaaggggaagtctgtgagggatctagccattttacagtga
DBGET
integrated database retrieval system
