Sardina pilchardus (sardine): 134062451
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Entry
134062451 CDS
T10667
Symbol
cpdp
Name
(RefSeq) CPD photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spil03400
]
134062451 (cpdp)
Enzymes [BR:
spil01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
134062451 (cpdp)
DNA repair and recombination proteins [BR:
spil03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
134062451 (cpdp)
Prokaryotic type
134062451 (cpdp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
134062451
NCBI-ProteinID:
XP_062374448
LinkDB
All DBs
Position
2:10494038..10500326
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AA seq
548 aa
AA seq
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MRLLVLSAFRHFVKFRPAEAELLSQAFPRPCLRIYSTSDTIMAPKKADLKRNAQSPNTSK
AKQQKVDRVEGWLESEVAELRRGTRDMKFNNKRLRYLSDTKTVQQGSEGVLYWMGRDQRV
QDNWALIYAQQLAITEKLPLHICFCLMPTFLEATFRHYSFMLKGLQEVAKESSVLDIQFH
LLSGFPGDTLPGFIKEWNMGAVVTDFWPLRDPTQWVEDVKKTISPDIPIIQVDAHNVVPC
WEASGKLEYSARTIRAKITKLLPTFLTEFPVVDKHPHTTSRTAKAIDWSETLSSLEVDRC
VGEVDWAKPGTSGGMATLESFIDQRLRDFAPLRNNPNVAALSQLSPWIHSGNLSAQRVVR
QVQKNGKKFSESVASFTEELVVRRELADNFCFYNKNYDNIEGAYEWARKTLKDHAKDERT
HVYTREQLEQAKTHDQLWNAAQIQVLTEGKMHGFMRMYWAKKILEWTSSPEEALAIAIYL
NDRYSLDGCDPNGYVGCMWSICGIHDQGWAERPVFGKIRYMNYAGCKRKFDVERYEKMYS
KKVPNFEK
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgcggttactggtcctgtctgcctttagacactttgtcaaattcagacctgctgaagct
gagctgctgagccaggccttccccagaccctgtttaaggatttattccacatcggacacc
atcatggcccccaaaaaagcagacctcaagcgcaatgcacagtcaccgaatacaagcaag
gcaaaacaacagaaagttgacagagtggaaggatggctagaaagtgaagtggctgagcta
cgaagagggactcgggatatgaagttcaacaacaagcgtctcagatatttgtctgatacc
aaaacagttcagcaaggatcagaaggggtgctgtactggatgggaagggatcagcgagtt
caagataattgggcgttgatctatgcccaacaattggccatcacagagaaactacccctg
cacatttgcttctgcctcatgccaacatttttagaggcaacgtttagacactattccttc
atgttaaaaggactacaggaggtggccaaggaaagcagtgttctggatattcaattccat
cttctcagtggcttccctggagatacccttcctggctttataaaggagtggaacatgggg
gctgtcgtaactgatttttggcctctcagggatccaactcagtgggtagaagatgtcaaa
aaaacaatcagcccagacatccctatcattcaggtggatgctcataatgtggtgccttgc
tgggaggcatctggaaaacttgagtattcagccaggaccatccgtgccaagattactaaa
ctgctgcctacgtttctcactgaatttcctgttgttgacaagcatccacacacaacctca
agaaccgccaaggcaatagattggagtgagactctgtcatctctggaggtggatcggtgt
gttggtgaggtagactgggcgaagcctggaacttcagggggcatggccacgctggagtct
ttcattgatcagcgcttgcgtgactttgcccctctccggaacaaccccaacgtggctgcc
ctcagccagctgtctccgtggatccactctggtaatctctcagcccagcgcgtggtccgc
caggtccaaaagaatggcaagaaattcagcgaatcggtggcctcctttacagaggagttg
gtggtgcgcagggaacttgcagacaatttctgcttttacaacaagaactatgacaacatt
gagggtgcatatgagtgggcccggaagaccctgaaggatcatgcaaaagacgaaaggact
cacgtctacactcgggagcaactggaacaagcgaagacccatgaccaactttggaatgca
gcccagattcaggtgttgactgaagggaagatgcatggattcatgagaatgtactgggcc
aaaaagatcctggaatggacctcctctccggaagaagcacttgctatcgctatttatctt
aatgaccgctattctttagatggatgtgaccctaatggatatgttggctgcatgtggtcc
atttgtggcatacatgaccagggttgggctgaaagacctgtctttggaaaaattcgctac
atgaactatgctggatgcaaacgcaagtttgatgttgagcgctatgagaagatgtacagc
aagaaggtacctaatttcgaaaaataa
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