Sardina pilchardus (sardine): 134062487
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Entry
134062487 CDS
T10667
Symbol
rbm17
Name
(RefSeq) splicing factor 45 isoform X1
KO
K12840
splicing factor 45
Organism
spil Sardina pilchardus (sardine)
Pathway
spil03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134062487 (rbm17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spil03041
]
134062487 (rbm17)
Spliceosome [BR:
spil03041
]
Complex A
U2 snRNP components
U2 related factors
134062487 (rbm17)
Complex B
134062487 (rbm17)
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GFIT
Motif
Pfam:
G-patch
RRM_1
Motif
Other DBs
NCBI-GeneID:
134062487
NCBI-ProteinID:
XP_062374492
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Position
17:8236079..8247529
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AA seq
438 aa
AA seq
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MSLYDDLGVGASDTKTEGWSKNFKLLQSQLKVKKAALTQAKSQRMKQTTVLAPVIDLKRG
SAGDERQILDTPPRIAPGLKDAAPSSFSSGDVLIPLADEYDPMFPNDYEKVVKRHREERQ
RQREQERQKEIEEREKKRKERHEGSAPSGFSRFPTEGESDEEDEFDKEKRKRAIGGAAIA
PPTSLVERDSAVSFSYEDEGRGSRGSKAAIPPPMYEDSERPRSPPGPTNSFLANMGGTVA
HKIMQKYGFREGQGLGKHEQGLSTALSVEKTSKRGGKIIIGETTEKGSGQAAADPPGWML
GAAAEAQKKTAAAAAAAAGVGAGPGSGSEPNPLTEILKCPTKVVILRNMVGRGEVDDDLE
AETKEECEKYGKVTKCVIFEIAQVTDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVK
ACFYNLDKFRVLDLGEAV
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgtacgatgatctgggagtgggagcgagcgacactaaaacggaaggctggtcc
aaaaacttcaaattgctccagtcgcagctcaaagtgaagaaagctgccctcacacaggcc
aagagccagcgcatgaagcagactacagtgttggctcctgttattgacctgaaacgagga
agtgccggggatgagcgacagatcttagacacaccccctcgcatcgccccaggactcaag
gacgcggccccgagcagcttctcgtcaggggacgtgctgatcccgctggcggacgagtat
gaccccatgttccccaacgactacgagaaggtggtgaagcggcaccgcgaggagcgccag
cggcagagggagcaggagcggcagaaggagatcgaggagcgggaaaagaagaggaaggag
cgccatgaaggcagcgctcccagtggcttctcccgcttcccaacagagggcgagtccgac
gaggaggacgagttcgacaaggagaagaggaagagggccataggaggagcagctattgcc
ccacctacgtctttggttgaaagagactcagcggtttcattttcatatgaagatgaaggt
cgggggtcgcgaggatccaaggctgcgatcccgcctcccatgtacgaagattctgaacga
cctcgctctccccctggccctaccaactcgttccttgccaacatgggaggcacggtggcc
cataagatcatgcagaagtacgggttccgcgagggccagggcctgggcaagcatgagcag
gggctgagcacagcgctctccgtggagaagaccagcaagagggggggcaagatcatcatc
ggagaaaccaccgagaagggttccggccaggctgctgcagatccacctggttggatgctt
ggtgctgcagccgaagcgcagaagaaaacagcggcggcggctgcagcagcagcaggagta
ggagcaggcccaggctcaggctccgagcccaaccctctcacggaaatactcaagtgtccc
accaaagtagttattctaaggaatatggtggggcggggagaggtggatgatgatctggag
gctgagacaaaagaggagtgtgaaaaatatggcaaagtcaccaagtgtgtcatctttgag
atcgcccaagtgactgacgatgaagctgttcgtatcttcctggagtttgagagagtggag
tcagccattaaagctgtggtggacctgaacggccgatacttcggtggacgagtagtgaag
gcgtgtttctacaatctggacaaatttagagtgttggatctaggagaagctgtgtga
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